RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PAFAH1B3Q15102 231 aaKnown RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 DHCR24Q15392 516 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 GAB4Q2WGN9 574 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 FBXO43Q4G163 708 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 RABGAP1LQ5R372 815 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 ZFYVE27Q5T4F4 411 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 RFWD3Q6PCD5 774 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 BBS12Q6ZW61 710 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 SLC13A5Q86YT5 568 aaPredicted RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 CREG2Q8IUH2 290 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 LGI2Q8N0V4 545 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 PQLC3Q8N755 202 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 HJURPQ8NCD3 748 aaPredicted RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 TTC16Q8NEE8 873 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 ACTRT1Q8TDG2 376 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 COG1Q8WTW3 980 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 EZH1Q92800 747 aaPredicted RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 EXOC4Q96A65 974 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 PRICKLE1Q96MT3 831 aaPredicted RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 RPRD1AQ96P16 312 aaPredicted RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 CALN1Q9BXU9 219 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 MAK16Q9BXY0 300 aaKnown RBP9.35□□□□□ -0.91
SMG5-203ENST00000473643 KLC2Q9H0B6 622 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 EPC1Q9H2F5 836 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 CATSPERBQ9H7T0 1116 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 ARHGEF4Q9NR80 690 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 SPHK2Q9NRA0 654 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 KLHL11Q9NVR0 708 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 TMEM248Q9NWD8 314 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 DCHS1Q96JQ0 3298 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 TICRRQ7Z2Z1 1910 aa9.35□□□□□ -0.91
SMG5-203ENST00000473643 A0A1B0GVM2 712 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 TCAF2A6NFQ2 919 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 SCAMP3O14828 347 aaKnown RBP9.34□□□□□ -0.91
SMG5-203ENST00000473643 HOXC11O43248 304 aaPredicted RBP9.34□□□□□ -0.91
SMG5-203ENST00000473643 DAPK3O43293 454 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 CEP104O60308 925 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 CNTN5O94779 1100 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 TJP3O95049 919 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 CYBBP04839 570 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 CYP17A1P05093 508 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 KRT10P13645 584 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 AMPD1P23109 780 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 OPRD1P41143 372 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 MAPKAPK2P49137 400 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 DNA2P51530 1060 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 IRAK1P51617 712 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 RPS24P62847 133 aaKnown RBP9.34□□□□□ -0.91
SMG5-203ENST00000473643 ADCY2Q08462 1091 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 ALFQ53S48 1182 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 SEL1L2Q5TEA6 688 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 FYB2Q5VWT5 728 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 NCBP2-AS2Q69YL0 99 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 RWDD4Q6NW29 188 aaKnown RBP9.34□□□□□ -0.91
SMG5-203ENST00000473643 AADACL2Q6P093 401 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 TMEM25Q86YD3 366 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 CCDC50Q8IVM0 306 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 UMODL1-AS1Q8N2C9 162 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 LZTR1Q8N653 840 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 PLD5Q8N7P1 536 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 ZNF557Q8N988 423 aaPredicted RBP9.34□□□□□ -0.91
SMG5-203ENST00000473643 P2RY11Q96G91 374 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 PSMB7Q99436 277 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 HERPUD2Q9BSE4 406 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 MPP6Q9NZW5 540 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 CDC23Q9UJX2 597 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 FBXO10Q9UK96 956 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 TBC1D30Q9Y2I9 924 aa9.34□□□□□ -0.91
SMG5-203ENST00000473643 MIA3Q5JRA6 1907 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 CCDC163A0A0D9SF12 145 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 TYW5A2RUC4 315 aaKnown RBP9.33□□□□□ -0.92
SMG5-203ENST00000473643 K7EQS6 105 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 APOC4-APOC2K7ER74 178 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 APOL1O14791 398 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 ZNF185O15231 689 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 HRO43593 1189 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 TSPAN3O60637 253 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 CST8O60676 142 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 TBL1XO60907 577 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 RNF40O75150 1001 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 LUC7L3O95232 432 aaKnown RBP9.33□□□□□ -0.92
SMG5-203ENST00000473643 ADH1CP00326 375 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 APOC2P02655 101 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 FGGP02679 453 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 TGM2P21980 687 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 HOXD9P28356 352 aaPredicted RBP9.33□□□□□ -0.92
SMG5-203ENST00000473643 CNR2P34972 360 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 NR2C2P49116 596 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 SGSHP51688 502 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 NDST2P52849 883 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 YBEYP58557 167 aaPredicted RBP9.33□□□□□ -0.92
SMG5-203ENST00000473643 GAD2Q05329 585 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 DMWDQ09019 674 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 SIX1Q15475 284 aaPredicted RBP9.33□□□□□ -0.92
SMG5-203ENST00000473643 LY6G5CQ5SRR4 150 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 AFMIDQ63HM1 303 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 PKN3Q6P5Z2 889 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 ZNF783Q6ZMS7 281 aa9.33□□□□□ -0.92
SMG5-203ENST00000473643 BZW1Q7L1Q6 419 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms