RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 HDAC3O15379 428 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 USP12O75317 370 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 C2P06681 752 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 ME2P23368 584 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 MS4A2Q01362 244 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 ART3Q13508 389 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 CEACAM7Q14002 265 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 PID1Q7Z2X4 250 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 SETD3Q86TU7 594 aaPredicted RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 ZNF567Q8N184 647 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 DDI1Q8WTU0 396 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 ISL2Q96A47 359 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 CNDP1Q96KN2 507 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 CATSPER2Q96P56 530 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 C11orf84Q9BUA3 381 aaPredicted RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 NUF2Q9BZD4 464 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 RAP2CQ9Y3L5 183 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 hCG_2014768A0A024R1R8 64 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 A0A087WZ62 844 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 RPL14P50914 215 aaKnown RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 SLC26A9Q7LBE3 791 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 TICAM1Q8IUC6 712 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 KBTBD7Q8WVZ9 684 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 FDXACB1Q9BRP7 624 aaPredicted RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 MRPL1Q9BYD6 325 aaKnown RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 RBM38Q9H0Z9 239 aaKnown RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 WDR41Q9HAD4 459 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 USP3Q9Y6I4 520 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 PIGNO95427 931 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 CCR10P46092 362 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 HSPA13P48723 471 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 ZNF280AP59817 542 aaPredicted RBP14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 PGAM4Q8N0Y7 254 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 SPATA33Q96N06 139 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 OXSMQ9NWU1 459 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 MID2Q9UJV3 735 aa14.53□□□□□ -0.08
NHLRC3-204ENST00000473371 STAU1O95793 577 aaKnown RBP14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 ADORA2BP29275 332 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 CDKL1Q00532 357 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 PDK1Q15118 436 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 DNAAF3Q8N9W5 541 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 OR6B3Q8NGW1 331 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 PRDM12Q9H4Q4 367 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 FAM124BQ9H5Z6 455 aaPredicted RBP14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 TASP1Q9H6P5 420 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 BFARQ9NZS9 450 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 KLHL8Q9P2G9 620 aaPredicted RBP14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 GTF2IRD1Q9UHL9 959 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 VPS28Q9UK41 221 aa14.52□□□□□ -0.08
NHLRC3-204ENST00000473371 SYNJ2BP-COX16A0A087WUM0 186 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 STX16-NPEPL1H3BU86 382 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 HBP1O60381 514 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 DPEP1P16444 411 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 ARF4P18085 180 aaPredicted RBP14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 GLUD2P49448 558 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 HPCAP84074 193 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 CELF3Q5SZQ8 465 aaKnown RBP14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 TMEM198Q66K66 360 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 PAOXQ6QHF9 649 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 CLEC14AQ86T13 490 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 PDCD6IPQ8WUM4 868 aaKnown RBP14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 DLG3Q92796 817 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 MARK4Q96L34 752 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 LMCD1Q9NZU5 365 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 COX16Q9P0S2 106 aa14.52□□□□□ -0.09
NHLRC3-204ENST00000473371 PFDN1O60925 122 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 TCN1P20061 433 aaPredicted RBP14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SAT1P21673 171 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 GRIA4P48058 902 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 CLCN2P51788 898 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 AMHR2Q16671 573 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 KLC3Q6P597 504 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 MICALL2Q8IY33 904 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 TMA16Q96EY4 203 aaKnown RBP14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 TSNARE1Q96NA8 513 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 ACE2Q9BYF1 805 aaPredicted RBP14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SENP6Q9GZR1 1112 aaPredicted RBP14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 EFCAB1Q9HAE3 211 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 VANGL2Q9ULK5 521 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 FZD10Q9ULW2 581 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 CDYLQ9Y232 598 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 NME7Q9Y5B8 376 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SRCAPQ6ZRS2 3230 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 BTBD19C9JJ37 291 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 KCNK1O00180 336 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SULT1E1P49888 294 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 NR1H2P55055 460 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 MPP3Q13368 585 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 MYBPC3Q14896 1274 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 ARL13AQ5H913 290 aaPredicted RBP14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 AMIGO2Q86SJ2 522 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SCYL1Q96KG9 808 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 DRC3Q9H069 523 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SMARCAD1Q9H4L7 1026 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 IGSF9Q9P2J2 1179 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 THEGQ9P2T0 379 aa14.51□□□□□ -0.09
NHLRC3-204ENST00000473371 SLC39A10Q9ULF5 831 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms