RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 MAN2B1O00754 1011 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 AURKAO14965 403 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 CD3EAPO15446 510 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 BUB1BO60566 1050 aaPredicted RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 MATN4O95460 622 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SERPINC1P01008 464 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 GNAT1P11488 350 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 NCF1P14598 390 aaPredicted RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 IL1R1P14778 569 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 KRT4P19013 534 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 AVPR2P30518 371 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 RAP1GAPP47736 663 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 NRIP1P48552 1158 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 MRPL12P52815 198 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 ZNF200P98182 395 aaPredicted RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 RNASELQ05823 741 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 TEFQ10587 303 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 GPS1Q13098 491 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SNW1Q13573 536 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 TRA2AQ13595 282 aaKnown RBP eCLIP6.2□□□□□ -1.42
RTF1-203ENST00000473214 EFTUD2Q15029 972 aaKnown RBP eCLIP6.2□□□□□ -1.422e-7■■■■■ 41.6
RTF1-203ENST00000473214 CNGA3Q16281 694 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 HADHQ16836 314 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 KCTD21Q4G0X4 260 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SLC44A4Q53GD3 710 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SHEQ5VZ18 495 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 LRIG3Q6UXM1 1119 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 LCNL1Q6ZST4 164 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 FAM214BQ7L5A3 538 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 MIER3Q7Z3K6 550 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 TAF8Q7Z7C8 310 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 NME9Q86XW9 330 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 C1QL4Q86Z23 238 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 P3H2Q8IVL5 708 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SFRP1Q8N474 314 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 AADATQ8N5Z0 425 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 LINC00469Q8N7U9 141 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 FAM184AQ8NB25 1140 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 OR2I1PQ8NGU4 316 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 MDM1Q8TC05 714 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 ZNF384Q8TF68 577 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SLC13A3Q8WWT9 602 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 DLG3Q92796 817 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 MIEF2Q96C03 454 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 SPACA9Q96E40 222 aaPredicted RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 DTNBP1Q96EV8 351 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 HEXIM2Q96MH2 286 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 GDAP1L1Q96MZ0 367 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 JAM3Q9BX67 310 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 B3GNT4Q9C0J1 378 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 IL21RQ9HBE5 538 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.2□□□□□ -1.42
RTF1-203ENST00000473214 POLR3BQ9NW08 1133 aaPredicted RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 ZNF70Q9UC06 446 aaPredicted RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 KCND3Q9UK17 655 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 INTS6Q9UL03 887 aaKnown RBP6.2□□□□□ -1.42
RTF1-203ENST00000473214 PSME2Q9UL46 239 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 RIMKLBQ9ULI2 386 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 CLEC4AQ9UMR7 237 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 TNFSF13BQ9Y275 285 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 MED16Q9Y2X0 877 aa6.2□□□□□ -1.42
RTF1-203ENST00000473214 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.2□□□□□ -1.42
RTF1-203ENST00000473214 FMN2Q9NZ56 1722 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PRAG1Q86YV5 1406 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 A0A087WZ62 844 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CAPN14A8MX76 684 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 F8VZ95 297 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 STMND1H3BQB6 276 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 BTN3A1O00481 513 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 IFIT3O14879 490 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 CYTIPO60759 359 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 GUCY1B2O75343 617 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ERLIN1O75477 346 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 FLOT1O75955 427 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ZBTB7AO95365 584 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CST3P01034 146 aaPredicted RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 EGR1P18146 543 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 JAK1P23458 1154 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 MCM3P25205 808 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PTPN3P26045 913 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 MCM5P33992 734 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PRKCIP41743 596 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CCR10P46092 362 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CDR1P51861 262 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ARFIP2P53365 341 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 ERVFC1P60507 584 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 YWHAZP63104 245 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 SPAG1Q07617 926 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PTP4A2Q12974 167 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 PLD1Q13393 1074 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TUBB2AQ13885 445 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 NOMO1Q15155 1222 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CLPPQ16740 277 aaPredicted RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 TRIM71Q2Q1W2 868 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 TDRD12Q587J7 1177 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 KCNT1Q5JUK3 1230 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 TEX35Q5T0J7 233 aa6.19□□□□□ -1.42
RTF1-203ENST00000473214 CWF19L1Q69YN2 538 aaKnown RBP6.19□□□□□ -1.42
RTF1-203ENST00000473214 KLHL35Q6PF15 583 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms