RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 C18orf8Q96DM3 657 aa5.14□□□□□ -1.59
CD46-213ENST00000471987 SORBS1Q9BX66 1292 aaKnown RBP5.14□□□□□ -1.59
CD46-213ENST00000471987 IGSF9Q9P2J2 1179 aa5.14□□□□□ -1.59
CD46-213ENST00000471987 MAGED2Q9UNF1 606 aaPredicted RBP5.14□□□□□ -1.59
CD46-213ENST00000471987 MBD3L5A6NJ08 208 aaPredicted RBP5.13□□□□□ -1.59
CD46-213ENST00000471987 SAC3D1A6NKF1 404 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 SLC38A8A6NNN8 435 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 DNPH1O43598 174 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 GLUD1P00367 558 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 PKMP14618 531 aaKnown RBP5.13□□□□□ -1.59
CD46-213ENST00000471987 RFX5P48382 616 aaPredicted RBP5.13□□□□□ -1.59
CD46-213ENST00000471987 GLUD2P49448 558 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 DUSP6Q16828 381 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 IZUMO4Q1ZYL8 232 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 TMEM200AQ86VY9 491 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 ENDOVQ8N8Q3 282 aaKnown RBP5.13□□□□□ -1.59
CD46-213ENST00000471987 LMO3Q8TAP4 145 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 CLEC4CQ8WTT0 213 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 MECRQ9BV79 373 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 POLDIP3Q9BY77 421 aaKnown RBP5.13□□□□□ -1.59
CD46-213ENST00000471987 RMI1Q9H9A7 625 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 ACTR5Q9H9F9 607 aaPredicted RBP5.13□□□□□ -1.59
CD46-213ENST00000471987 ARL15Q9NXU5 204 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 CHPF2Q9P2E5 772 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 PKP3Q9Y446 797 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 PCDHGB1Q9Y5G3 927 aa5.13□□□□□ -1.59
CD46-213ENST00000471987 MS4A18H0YCH9 400 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 I6L893 689 aaPredicted RBP5.12□□□□□ -1.59
CD46-213ENST00000471987 VWA5AO00534 786 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 PARNO95453 639 aaKnown RBP5.12□□□□□ -1.59
CD46-213ENST00000471987 NBPF7P0C2Y1 421 aaPredicted RBP5.12□□□□□ -1.59
CD46-213ENST00000471987 KLRC2P26717 231 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 FSCBQ5H9T9 825 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 VWA5B1Q5TIE3 1220 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 CUZD1Q86UP6 607 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 CMASQ8NFW8 434 aaPredicted RBP5.12□□□□□ -1.59
CD46-213ENST00000471987 PARD3BQ8TEW8 1205 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 DNASE2BQ8WZ79 361 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 RSC1A1Q92681 617 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 KIAA1191Q96A73 305 aa5.12□□□□□ -1.59
CD46-213ENST00000471987 HOXB9P17482 250 aaPredicted RBP5.11□□□□□ -1.59
CD46-213ENST00000471987 OAZ1P54368 228 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 TRAF2Q12933 501 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 PLK5Q496M5 336 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 SLC30A9Q6PML9 568 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 KSR2Q6VAB6 950 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 USP43Q70EL4 1123 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 TMEM217Q8N7C4 229 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 LRRC57Q8N9N7 239 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 FAM110DQ8TAY7 271 aaPredicted RBP5.11□□□□□ -1.59
CD46-213ENST00000471987 HMGB4Q8WW32 186 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 NPAS1Q99742 590 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 FRMD8Q9BZ67 464 aaPredicted RBP5.11□□□□□ -1.59
CD46-213ENST00000471987 LIN7CQ9NUP9 197 aaKnown RBP5.11□□□□□ -1.59
CD46-213ENST00000471987 CNTN6Q9UQ52 1028 aa5.11□□□□□ -1.59
CD46-213ENST00000471987 BTBD18B2RXH4 712 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 STMND1H3BQB6 276 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 ASNA1O43681 348 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 LIASO43766 372 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 CYP2J2P51589 502 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 RCAN1P53805 252 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 ZBTB16Q05516 673 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 TBRG1Q3YBR2 411 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 TRIM60Q495X7 471 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 C8orf82Q6P1X6 216 aaPredicted RBP5.1□□□□□ -1.59
CD46-213ENST00000471987 Q6ZSV7 163 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 ZNF367Q7RTV3 350 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 SYTL1Q8IYJ3 562 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 DEPTORQ8TB45 409 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 ADAMTS14Q8WXS8 1223 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 ZNF333Q96JL9 665 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 PPP1R10Q96QC0 940 aaKnown RBP5.1□□□□□ -1.59
CD46-213ENST00000471987 MYD88Q99836 296 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 HIPK3Q9H422 1215 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 PLSCR4Q9NRQ2 329 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 TCF20Q9UGU0 1960 aaKnown RBP5.1□□□□□ -1.59
CD46-213ENST00000471987 ICAM5Q9UMF0 924 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 PHTF1Q9UMS5 762 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 RAP2CQ9Y3L5 183 aa5.1□□□□□ -1.59
CD46-213ENST00000471987 CKAP5Q14008 2032 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 TCRBV7S3A2A0A539 114 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM90A18PA6NE21 464 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM90A16PA6NEW6 464 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM90A9PA6NNJ1 464 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM90A5PA8MXJ8 464 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 IGKV3-20P01619 116 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 HLA-DQA2P01906 255 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM90A15PP0C7V4 464 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM90A14PP0C7W9 464 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 FCGR1AP12314 374 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 ABCB4P21439 1286 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 PCP4P48539 62 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 COMPP49747 757 aaPredicted RBP5.09□□□□□ -1.59
CD46-213ENST00000471987 PMS2P54278 862 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 TDRD12Q587J7 1177 aaKnown RBP5.09□□□□□ -1.59
CD46-213ENST00000471987 FAM171A1Q5VUB5 890 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 TNIP3Q96KP6 325 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 KLHL31Q9H511 634 aa5.09□□□□□ -1.59
CD46-213ENST00000471987 ZDHHC7Q9NXF8 308 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms