RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 PCID2Q5JVF3 399 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 STRA8Q7Z7C7 330 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 SAPCD2Q86UD0 394 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 DCP1BQ8IZD4 617 aaKnown RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 DCLK2Q8N568 766 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 KLHDC9Q8NEP7 349 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 GABPB2Q8TAK5 448 aaPredicted RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 RDH11Q8TC12 318 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 EDEM1Q92611 657 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 TSNARE1Q96NA8 513 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 FCRL3Q96P31 734 aaPredicted RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 AGAP3Q96P47 875 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 ADAM2Q99965 735 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 TRIM56Q9BRZ2 755 aaKnown RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 CADM1Q9BY67 442 aaKnown RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 CEP41Q9BYV8 373 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 C1orf21Q9H246 121 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 SMOC2Q9H3U7 446 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 MRM3Q9HC36 420 aaKnown RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 SNX15Q9NRS6 342 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 DNAJC28Q9NX36 388 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 COPG2Q9UBF2 871 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 TAGLN3Q9UI15 199 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 EMCNQ9ULC0 261 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 SCN10AQ9Y5Y9 1956 aa10.85□□□□□ -0.67
APLF-204ENST00000471727 COL4A4P53420 1690 aaPredicted RBP10.85□□□□□ -0.67
APLF-204ENST00000471727 TMEM114B3SHH9 223 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 TMEM189-UBE2V1I3L0A0 370 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 I6L893 689 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 MATN3O15232 486 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ALDH1A1P00352 501 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 GSRP00390 522 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 PGK1P00558 417 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 POMCP01189 267 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ASGR1P07306 291 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 RALBP11234 206 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 FGF3P11487 239 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 COL6A2P12110 1019 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 CPA3P15088 417 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ALOX15P16050 662 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 IGFBP6P24592 240 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 GCKP35557 465 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 HARS2P49590 506 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 AFF1P51825 1210 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 RAP1GDS1P52306 607 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 CRHR2Q13324 411 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 MPP3Q13368 585 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 LPIN1Q14693 890 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 NFE2Q16621 373 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 ANO4Q32M45 955 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 C6orf163Q5TEZ5 329 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 CD300LGQ6UXG3 332 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 KCNMB4Q86W47 210 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 UNC5BQ8IZJ1 945 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ATPAF2Q8N5M1 289 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 TEX9Q8N6V9 391 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 NPWQ8N729 165 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ZSCAN18Q8TBC5 510 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 STON2Q8WXE9 905 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 TRIB2Q92519 343 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 FATE1Q969F0 183 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 FUBP3Q96I24 572 aaKnown RBP eCLIP10.84□□□□□ -0.67
APLF-204ENST00000471727 C1orf74Q96LT6 269 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 RILPQ96NA2 401 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 SERPINB11Q96P15 392 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 IL12RB2Q99665 862 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 GORASP1Q9BQQ3 440 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 MLPHQ9BV36 600 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 NMUR2Q9GZQ4 415 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ENTPD7Q9NQZ7 604 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 BATF3Q9NR55 127 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 FBXO6Q9NRD1 293 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 TMEM30AQ9NV96 361 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 TAS2R1Q9NYW7 299 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 PPARGC1AQ9UBK2 798 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 L3MBTL1Q9Y468 752 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 CDY1Q9Y6F8 540 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 TRIP12Q14669 1992 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 A8MUI8 341 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 F5H423 210 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 F8W8V4 182 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 TNFRSF10BO14763 440 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 MGEA5O60502 916 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 PEX11AO75192 247 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 SNUPNO95149 360 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 PAMP19021 973 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 AOC1P19801 751 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 BRCC3P46736 316 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ABCE1P61221 599 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 YWHAHQ04917 246 aaPredicted RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 ASPHQ12797 758 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ZBTB17Q13105 803 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 MTA1Q13330 715 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 PCLAFQ15004 111 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 ZRSR2Q15696 482 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 CMPK2Q5EBM0 449 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 MANEALQ5VSG8 457 aa10.84□□□□□ -0.67
APLF-204ENST00000471727 RWDD4Q6NW29 188 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 ZNF598Q86UK7 904 aaKnown RBP10.84□□□□□ -0.67
APLF-204ENST00000471727 MON1AQ86VX9 555 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms