RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 MCF2LO15068 1137 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 NARSO43776 548 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 PHF2O75151 1096 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 GLDCP23378 1020 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 GJA4P35212 333 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 COILP38432 576 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 GARSP41250 739 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 YBEYP58557 167 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 DARS2Q6PI48 645 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 LEKR1Q6ZMV7 388 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ZNF354CQ86Y25 554 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ETFBKMTQ8IXQ9 262 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 NXPE3Q969Y0 559 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 KRT12Q99456 494 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 FEM1AQ9BSK4 669 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 MUC3BQ9H195 1237 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 DNAJC17Q9NVM6 304 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 DONSONQ9NYP3 566 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 FBXO10Q9UK96 956 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 INTS6Q9UL03 887 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CTAGE15A4D2H0 777 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 J3KR12 359 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CACNG3O60359 315 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 TULP3O75386 442 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CISD3P0C7P0 127 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CTAGE8P0CG41 777 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 VAV1P15498 845 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 RBL1P28749 1068 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 NRLP54845 237 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ZP2Q05996 745 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 AP1B1Q10567 949 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 NR1H3Q13133 447 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 SERINC3Q13530 473 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 BYSLQ13895 437 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 PDK1Q15118 436 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 OASLQ15646 514 aaKnown RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ITPRIPL2Q3MIP1 535 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 IER5LQ5T953 404 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 IL31Q6EBC2 164 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CTAGE6Q86UF2 777 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CCDC117Q8IWD4 279 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ADHFE1Q8IWW8 467 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CTAGE4Q8IX94 777 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 CEP112Q8N8E3 955 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 C12orf50Q8NA57 414 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 NKD2Q969F2 451 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 TMEM121Q9BTD3 319 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 MAGEH1Q9H213 219 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 KIAA1522Q9P206 1035 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ACTL7AQ9Y615 435 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 RAD54BQ9Y620 910 aa19.65■□□□□ 0.74
PSPC1-203ENST00000471658 ARHGAP42A6NI28 874 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 SNAP91O60641 907 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 MAFKO60675 156 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 PARP15Q460N3 678 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 BZW1Q7L1Q6 419 aaKnown RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 PRUNE1Q86TP1 453 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 NOA1Q8NC60 698 aaKnown RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 TFB1MQ8WVM0 346 aaKnown RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 QKIQ96PU8 341 aaKnown RBP eCLIP19.64■□□□□ 0.738e-13■■■■□ 24.5
PSPC1-203ENST00000471658 XPO6Q96QU8 1125 aaKnown RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 ACE2Q9BYF1 805 aaPredicted RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 FRMD8P1Q9BZ68 369 aaPredicted RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 ATP13A1Q9HD20 1204 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 HOMER3Q9NSC5 361 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 IPO11Q9UI26 975 aaKnown RBP19.64■□□□□ 0.73
PSPC1-203ENST00000471658 ZNF148Q9UQR1 794 aa19.64■□□□□ 0.73
PSPC1-203ENST00000471658 NYNRINQ9P2P1 1898 aaKnown RBP19.63■□□□□ 0.73
PSPC1-203ENST00000471658 COL4A3Q01955 1670 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 CCDC188H7C350 402 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 RIOK3O14730 519 aaKnown RBP19.63■□□□□ 0.73
PSPC1-203ENST00000471658 MX2P20592 715 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 OPRD1P41143 372 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 XRCC4Q13426 336 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 PRKD1Q15139 912 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-203ENST00000471658 GEN1Q17RS7 908 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 SLC45A4Q5BKX6 768 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 DRICH1Q6PGQ1 229 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-203ENST00000471658 CCDC137Q6PK04 289 aaKnown RBP19.63■□□□□ 0.73
PSPC1-203ENST00000471658 ATPAF2Q8N5M1 289 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 MNS1Q8NEH6 495 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 CSGALNACT1Q8TDX6 532 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 HDAC11Q96DB2 347 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 USP29Q9HBJ7 922 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 AMACRQ9UHK6 382 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 GGA2Q9UJY4 613 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 VPS28Q9UK41 221 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 MYO10Q9HD67 2058 aa19.63■□□□□ 0.73
PSPC1-203ENST00000471658 PPP1R12AO14974 1030 aaPredicted RBP19.62■□□□□ 0.73
PSPC1-203ENST00000471658 CHRNA3P32297 505 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 DGKGP49619 791 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 GDF10P55107 478 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 PPIDQ08752 370 aaKnown RBP19.62■□□□□ 0.73
PSPC1-203ENST00000471658 PLEKHG6Q3KR16 790 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 FUT11Q495W5 492 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 PITRM1Q5JRX3 1037 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 TMEM215Q68D42 235 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 ZNF783Q6ZMS7 281 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 SFTPA1Q8IWL2 248 aa19.62■□□□□ 0.73
PSPC1-203ENST00000471658 TSGA13Q96PP4 275 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms