RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 PRR23AA6NEV1 266 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 AKR1B15C9JRZ8 316 aaPredicted RBP12.73□□□□□ -0.37
LINC00888-202ENST00000471496 CLDN11O75508 207 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 POLR2EP19388 210 aaKnown RBP12.73□□□□□ -0.37
LINC00888-202ENST00000471496 NUMBP49757 651 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 GALCP54803 685 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 GUCA2AQ02747 115 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 SEMA3BQ13214 749 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 SLC12A1Q13621 1099 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 CNGA4Q8IV77 575 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 PYROXD2Q8N2H3 581 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 GAB3Q8WWW8 586 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 NKD2Q969F2 451 aaPredicted RBP12.73□□□□□ -0.37
LINC00888-202ENST00000471496 ERLEC1Q96DZ1 483 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 PEBP4Q96S96 227 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 PACSIN1Q9BY11 444 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 TPSD1Q9BZJ3 242 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 POLMQ9NP87 494 aaPredicted RBP12.73□□□□□ -0.37
LINC00888-202ENST00000471496 PPARGC1AQ9UBK2 798 aaKnown RBP12.73□□□□□ -0.37
LINC00888-202ENST00000471496 OR12D3Q9UGF7 316 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 FZD10Q9ULW2 581 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 SCINQ9Y6U3 715 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 THADAQ6YHU6 1953 aa12.73□□□□□ -0.37
LINC00888-202ENST00000471496 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 FAM187AA6NFU0 413 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SRGAP2O75044 1071 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 LRIG2O94898 1065 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ATP5BP06576 529 aaKnown RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 TPM1P09493 284 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 HLA-EP13747 358 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 JUNDP17535 347 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 NDUFV2P19404 249 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 PSMA2P25787 234 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 CNR2P34972 360 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ZNF177Q13360 481 aaPredicted RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 CAMK2GQ13555 558 aaPredicted RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ARL13BQ3SXY8 428 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SDE2Q6IQ49 451 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 LRRC31Q6UY01 552 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 TFAP2DQ7Z6R9 452 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 NLRP14Q86W24 1093 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ZNF366Q8N895 744 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 PSMB7Q99436 277 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SLC6A17Q9H1V8 727 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 NHEJ1Q9H9Q4 299 aaPredicted RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 MRPL47Q9HD33 250 aaKnown RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 LAMA1P25391 3075 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 NUP205Q92621 2012 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 RIF1Q5UIP0 2472 aaKnown RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 CFAP54Q96N23 3096 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 DCLK1O15075 740 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 LRCH4O75427 683 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ASLP04424 464 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 L1CAMP32004 1257 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 MRE11P49959 708 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 COPAP53621 1224 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SCYL2Q6P3W7 929 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 CCDC117Q8IWD4 279 aaPredicted RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 FRMD1Q8N878 549 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 HMGB4Q8WW32 186 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 MRGPRX1Q96LB2 322 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 MKRN2Q9H000 416 aaKnown RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 MTG2Q9H4K7 406 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 CD93Q9NPY3 652 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SPTLC3Q9NUV7 552 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 NDFIP2Q9NV92 336 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 ZNHIT6Q9NWK9 470 aaKnown RBP12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SLCO3A1Q9UIG8 710 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 PLA2G4CQ9UP65 541 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 SDK1Q7Z5N4 2213 aa12.72□□□□□ -0.37
LINC00888-202ENST00000471496 RALGAPA1Q6GYQ0 2036 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 A0A0D9SEW6 157 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 RPP40O75818 363 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 ALDH1A2O94788 518 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 LMNAP02545 664 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 EPHX1P07099 455 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 TCF4P15884 667 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 MIPP30301 263 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 P2RY2P41231 377 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 STK19P49842 368 aaPredicted RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 AIF1P55008 147 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 OXCT1P55809 520 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 ECT2LQ008S8 904 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 E2F5Q15329 346 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 CA9Q16790 459 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 MAP7D1Q3KQU3 841 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 FNDC3BQ53EP0 1204 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 RNF219Q5W0B1 726 aaPredicted RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 ALYREFQ86V81 257 aaKnown RBP12.71□□□□□ -0.38
LINC00888-202ENST00000471496 NIPA2Q8N8Q9 360 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 KDM1BQ8NB78 822 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 RLN3Q8WXF3 142 aa12.71□□□□□ -0.38
LINC00888-202ENST00000471496 BTBD6Q96KE9 485 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms