RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 PLA2G4BP0C869 781 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 SRGAP2BP0DMP2 458 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 FOSL2P15408 326 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 CYP11B2P19099 503 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 HK1P19367 917 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 SLC6A4P31645 630 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 NAMPTP43490 491 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 TOB1P50616 345 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 RAP2BP61225 183 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 RAB1AP62820 205 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 CREMQ03060 361 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 KRT17Q04695 432 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 PLP2Q04941 152 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 RESTQ13127 1097 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 PRPF4BQ13523 1007 aaKnown RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 UBXN2BQ14CS0 331 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 SLC39A14Q15043 492 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 FLYWCH1Q4VC44 716 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 CCDC157Q569K6 752 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 ATXN7L2Q5T6C5 722 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 GPBP1Q86WP2 473 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 ATXN2LQ8WWM7 1075 aaKnown RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 LARP4BQ92615 738 aaKnown RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 SLC35A4Q96G79 324 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 LOXL4Q96JB6 756 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 TGS1Q96RS0 853 aaKnown RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 SH2D3AQ9BRG2 576 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 TCHPQ9BT92 498 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 WDCPQ9H6R7 721 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 FAM204AQ9H8W3 233 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 SIDT1Q9NXL6 827 aaKnown RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 ST6GALNAC2Q9UJ37 374 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 ODF2LQ9ULJ1 636 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 L1RE1Q9UN81 338 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 EXOC7Q9UPT5 735 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 CLIC4Q9Y696 253 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 CEP290O15078 2479 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 TRIP12Q14669 1992 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-208ENST00000469585 CNTNAP2Q9UHC6 1331 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 IGKV6-21A0A0C4DH24 114 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 TMEM150BA6NC51 233 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 H3BUI4 141 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 KIAA0391O15091 583 aaKnown RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 FOXD2O60548 495 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 KIF20AO95235 890 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 ZBED1O96006 694 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 POMCP01189 267 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 CA3P07451 260 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 MTHFD1P11586 935 aaKnown RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 IDEP14735 1019 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 GAP43P17677 238 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 CA8P35219 290 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 CTNNB1P35222 781 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 PPM1AP35813 382 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 ALDH7A1P49419 539 aaKnown RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 MGAT3Q09327 533 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 LLGL1Q15334 1064 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 KYAT1Q16773 422 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 DCAF4L1Q3SXM0 396 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 Q6ZRM9 215 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 DAAM2Q86T65 1068 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 SYT12Q8IV01 421 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 CCDC65Q8IXS2 484 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 LRRC43Q8N309 656 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 MYCT1Q8N699 235 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 ARNTL2Q8WYA1 636 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 TOP1MTQ969P6 601 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 ZNF668Q96K58 619 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 PLIN2Q99541 437 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 NFKBIZQ9BYH8 718 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 CCSER1Q9C0I3 900 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 PRO3102Q9H379 93 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 ELAC1Q9H777 363 aaKnown RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 PARVGQ9HBI0 331 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 RGS18Q9NS28 235 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 TMEM161AQ9NX61 479 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 USP25Q9UHP3 1055 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 FEZ2Q9UHY8 353 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 MORC2Q9Y6X9 1032 aaPredicted RBP6.74□□□□□ -1.33
PTCD3-208ENST00000469585 ADGRA3Q8IWK6 1321 aa6.74□□□□□ -1.33
PTCD3-208ENST00000469585 DRGXA6NNA5 263 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 E9PMD0 336 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 K7ENM7 598 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SLC43A1O75387 559 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 PRKCBP05771 671 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 RB1P06400 928 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 RHCEP18577 417 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 LAG3P18627 525 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 CDC25AP30304 524 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 DDIT3P35638 169 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SELENOPP49908 381 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 LIG4P49917 911 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 SCNN1GP51170 649 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 PEX3P56589 373 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 PTENP60484 403 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 RHDQ02161 417 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 ALCAMQ13740 583 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 KARSQ15046 597 aaKnown RBP6.73□□□□□ -1.33
PTCD3-208ENST00000469585 HS1BP3Q53T59 392 aa6.73□□□□□ -1.33
PTCD3-208ENST00000469585 HYIQ5T013 277 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms