RNA–Protein interactions for RNA: ENST00000469491.5

FNDC3B-207, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 2

Gene FNDC3B, Length 2,916 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-207ENST00000469491 ZNF669Q96BR6 464 aaPredicted RBP17.41■□□□□ 0.38
FNDC3B-207ENST00000469491 NSRP1Q9H0G5 558 aaKnown RBP17.41■□□□□ 0.38
FNDC3B-207ENST00000469491 EIF2B3Q9NR50 452 aaKnown RBP17.41■□□□□ 0.38
FNDC3B-207ENST00000469491 TLR8Q9NR97 1041 aaKnown RBP17.41■□□□□ 0.38
FNDC3B-207ENST00000469491 SCAMP3O14828 347 aaKnown RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 HOXA2O43364 376 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 TLR5O60602 858 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 SNRPAP09012 282 aaKnown RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 MLNP12872 115 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 TTC16Q8NEE8 873 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 DPF3Q92784 378 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 PRDM5Q9NQX1 630 aaPredicted RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 PCMTD2Q9NV79 361 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 COL4A4P53420 1690 aaPredicted RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 C5orf42Q9H799 3197 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 DOCK4Q8N1I0 1966 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 PRRC2BQ5JSZ5 2229 aaKnown RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 CXCL10P02778 98 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 MAXP61244 160 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 IRX4P78413 519 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 IKBKEQ14164 716 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 KCTD11Q693B1 232 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 SH2D5Q6ZV89 423 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 CFAP52Q8N1V2 620 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 CCDC63Q8NA47 563 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 AZIN2Q96A70 460 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 KLHL5Q96PQ7 755 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 NOL6Q9H6R4 1146 aaKnown RBP17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 RAD54BQ9Y620 910 aa17.4■□□□□ 0.38
FNDC3B-207ENST00000469491 J3KR12 359 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 PMPCBO75439 489 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 PGAM1P18669 254 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 DEFB103AP81534 67 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 FBXL22Q6P050 247 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 RTL3Q8N8U3 475 aaKnown RBP17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 ANKS4BQ8N8V4 417 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 LRRC8CQ8TDW0 803 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 PTPRN2Q92932 1015 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 ZNF512Q96ME7 567 aaPredicted RBP17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 ABCF3Q9NUQ8 709 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 RBM22Q9NW64 420 aaKnown RBP eCLIP17.39■□□□□ 0.376e-9■□□□□ 11
FNDC3B-207ENST00000469491 RFPL1O75677 317 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 ELAVL2Q12926 359 aaKnown RBP17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 ITPRIPL1Q6GPH6 555 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 PABPC5Q96DU9 382 aaKnown RBP17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 SRPK1Q96SB4 655 aaKnown RBP17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 AGAP2Q99490 1192 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 MECRQ9BV79 373 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 CWH43Q9H720 699 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 BFARQ9NZS9 450 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 TRHDEQ9UKU6 1024 aa17.39■□□□□ 0.37
FNDC3B-207ENST00000469491 SLC38A8A6NNN8 435 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 COPEO14579 308 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 FGF10O15520 208 aaPredicted RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 MTSS1O43312 755 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 NEBLO76041 1014 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 ZWINTO95229 277 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 SEC24AO95486 1093 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 HLA-DQB2P05538 268 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 ZNF135P52742 658 aaPredicted RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 OVGP1Q12889 678 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 PCSK7Q16549 785 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 USP41Q3LFD5 358 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 MSANTD2Q6P1R3 559 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 RFWD3Q6PCD5 774 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 HMCESQ96FZ2 354 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 IGSF21Q96ID5 467 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 RPRD1AQ96P16 312 aaPredicted RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 NACA2Q9H009 215 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 IL37Q9NZH6 218 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 ZFATQ9P243 1243 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 IPO11Q9UI26 975 aaKnown RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 PHTF1Q9UMS5 762 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 H7C4K7 107 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 RTN3O95197 1032 aaPredicted RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 POLBP06746 335 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 ACRP10323 421 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 NEFHP12036 1026 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 CSF2RAP15509 400 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 PDK4Q16654 411 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 SPATA21Q7Z572 469 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 ZNF75CPQ92670 426 aaPredicted RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 TMEM175Q9BSA9 504 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 BRD8Q9H0E9 1235 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 USP15Q9Y4E8 981 aaPredicted RBP17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 PLXNA3P51805 1871 aa17.38■□□□□ 0.37
FNDC3B-207ENST00000469491 FAM92AA1XBS5 289 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 KRT38O76015 456 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 GJB5O95377 273 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 CCNCP24863 283 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 HOXC13P31276 330 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 ITKQ08881 620 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 POU6F1Q14863 301 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 RASSF3Q86WH2 238 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 NDUFAF2Q8N183 169 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 ARHGAP18Q8N392 663 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 ATP2A3Q93084 1043 aa17.37■□□□□ 0.37
FNDC3B-207ENST00000469491 APOPT1Q96IL0 206 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms