RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SNX18Q96RF0 628 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 ORAI2Q96SN7 254 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 DHRS9Q9BPW9 319 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 C9orf16Q9BUW7 83 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 FBXO8Q9NRD0 319 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 SERPINA10Q9UK55 444 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 FBXO9Q9UK97 447 aaPredicted RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 AGTPBP1Q9UPW5 1226 aa9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 EIF3LQ9Y262 564 aaKnown RBP9.2□□□□□ -0.94
SMARCE1-207ENST00000469334 CFLARO15519 480 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HOXC11O43248 304 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ICMTO60725 284 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ENTPD3O75355 529 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CALB1P05937 261 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CSH1P0DML2 217 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CSH2P0DML3 217 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 PRKCAP17252 672 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 FGFR3P22607 806 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HIBADHP31937 336 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 IFNA8P32881 189 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 GRIK1P39086 918 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 IST1P53990 364 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 PRKCQQ04759 706 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 FSTL1Q12841 308 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CCDC58Q4VC31 144 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CCNYL2Q5T2Q4 361 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 VWA5B1Q5TIE3 1220 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 BROXQ5VW32 411 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 TWF2Q6IBS0 349 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC30A10Q6XR72 485 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 UNC5BQ8IZJ1 945 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SIMC1Q8NDZ2 872 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 PIK3C3Q8NEB9 887 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 USP13Q92995 863 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 BTN2A3PQ96KV6 586 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC39A3Q9BRY0 314 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 UPF3AQ9H1J1 476 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 PCIF1Q9H4Z3 704 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ATP13A3Q9H7F0 1226 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 C1orf112Q9NSG2 853 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 TBC1D22BQ9NU19 505 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MTMR4Q9NYA4 1195 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 PKD2L1Q9P0L9 805 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 BCS1LQ9Y276 419 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ST14Q9Y5Y6 855 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 GREB1LQ9C091 1923 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MN1Q10571 1320 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SBF2Q86WG5 1849 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HEATR9A2RTY3 570 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HMX2A2RU54 273 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SAC3D1A6NKF1 404 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 C3orf70A6NLC5 250 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 C6orf229H3BNL8 230 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 APOC4-APOC2K7ER74 178 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SOCS2O14508 198 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MSH4O15457 936 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CSPG5O95196 566 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HSPA4LO95757 839 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 APOC2P02655 101 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 FYNP06241 537 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 KRT7P08729 469 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HSPA1AP0DMV8 641 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 HSPA1BP0DMV9 641 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ITIH1P19827 911 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MATN1P21941 496 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 NR4A1P22736 598 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CAPGP40121 348 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 DPP6P42658 865 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MAGEA6P43360 314 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 NAMPTP43490 491 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SERPINB10P48595 397 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 RAD23AP54725 363 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MLLT10P55197 1068 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ECT2LQ008S8 904 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SLC9B1Q4ZJI4 515 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 LLGL2Q6P1M3 1020 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 TMC5Q6UXY8 1006 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 C10orf107Q8IVU9 208 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 UNC45BQ8IWX7 931 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ABRAQ8N0Z2 381 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ASCC1Q8N9N2 400 aaKnown RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 TP53INP1Q96A56 240 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 SLCO4A1Q96BD0 722 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 CBWD1Q9BRT8 395 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 MTG1Q9BT17 334 aaPredicted RBP9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 UNC93B1Q9H1C4 597 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 ST6GALNAC4Q9H4F1 302 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 NPAP1Q9NZP6 1156 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 PAK5Q9P286 719 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 RAD54BQ9Y620 910 aa9.19□□□□□ -0.94
SMARCE1-207ENST00000469334 A0A1W2PQ67 120 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 FADS2P1A8MWK0 482 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 KPNA7A9QM74 516 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
SMARCE1-207ENST00000469334 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms