RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 DAPK3O43293 454 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RAD51CO43502 376 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 CACNG3O60359 315 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 GCATO75600 419 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 CD46P15529 392 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 CCNCP24863 283 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 HOXD9P28356 352 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TNFRSF8P28908 595 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 GARSP41250 739 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 PLK1P53350 603 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 EIF3EP60228 445 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 PTK6Q13882 451 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 GAB4Q2WGN9 574 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 EML3Q32P44 896 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MPPE1Q53F39 396 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 DUPD1Q68J44 220 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RFWD3Q6PCD5 774 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MFSD6LQ8IWD5 586 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TP53INP2Q8IXH6 220 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TEX26Q8N6G2 289 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ZNF557Q8N988 423 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TDRD5Q8NAT2 981 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 CCDC26Q8TAB7 109 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 FIBINQ8TAL6 211 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 GRK7Q8WTQ7 553 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MYLIPQ8WY64 445 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 IRF7Q92985 503 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TMA16Q96EY4 203 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RPRD1AQ96P16 312 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 LRRC1Q9BTT6 524 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 SLC2A11Q9BYW1 496 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 SLC39A8Q9C0K1 460 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 SMG9Q9H0W8 520 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 UBE2ZQ9H832 354 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ANKZF1Q9H8Y5 726 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 PCDH9Q9HC56 1237 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 DMGDHQ9UI17 866 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 HEPACAM2A8MVW5 462 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RASA4BC9J798 803 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ARNTLO00327 626 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MTSS1O43312 755 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RASA4O43374 803 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MBTPS2O43462 519 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MAFKO60675 156 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ZMPSTE24O75844 475 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 LUC7L3O95232 432 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 S1PR4O95977 384 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TUBBP07437 444 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 IRF1P10914 325 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 VAV1P15498 845 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 IGFBP4P22692 258 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 MAGEA6P43360 314 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 KCNJ1P48048 391 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 OXCT1P55809 520 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 DYNLT1P63172 113 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 IFI35P80217 286 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 WASHC5Q12768 1159 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 SERINC3Q13530 473 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 SLC12A1Q13621 1099 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 HTR4Q13639 388 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 LEXMQ3ZCV2 418 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TANGO2Q6ICL3 276 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RWDD4Q6NW29 188 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 WDR93Q6P2C0 686 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 C1orf228Q6PIY5 440 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RHBDF2Q6PJF5 856 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 VITQ6UXI7 678 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 GET4Q7L5D6 327 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 OTOP3Q7RTS5 596 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 JAMLQ86YT9 394 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 CDKL3Q8IVW4 592 aaPredicted RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ETFBKMTQ8IXQ9 262 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 OR52K2Q8NGK3 314 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 BPIFB1Q8TDL5 484 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 DEPDC1BQ8WUY9 529 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ARHGEF2Q92974 986 aaKnown RBP8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ZNF599Q96NL3 588 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 IL12RB2Q99665 862 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 ERP44Q9BS26 406 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 FAM129AQ9BZQ8 928 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 LINC00597Q9H2U6 94 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 PDFQ9HBH1 243 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 TRPV5Q9NQA5 729 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 GDF3Q9NR23 364 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 SPHK2Q9NRA0 654 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 RAB21Q9UL25 225 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 HEY1Q9Y5J3 304 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 COL4A3Q01955 1670 aa8.36□□□□□ -1.07
NPHP3-204ENST00000469232 NUP205Q92621 2012 aa8.35□□□□□ -1.07
NPHP3-204ENST00000469232 NYNRINQ9P2P1 1898 aaKnown RBP8.35□□□□□ -1.07
NPHP3-204ENST00000469232 PPP1R12AO14974 1030 aaPredicted RBP8.35□□□□□ -1.07
NPHP3-204ENST00000469232 TTI1O43156 1089 aa8.35□□□□□ -1.07
NPHP3-204ENST00000469232 PRAMEF11O60813 436 aa8.35□□□□□ -1.07
NPHP3-204ENST00000469232 RAMP2O60895 175 aa8.35□□□□□ -1.07
NPHP3-204ENST00000469232 ECEL1O95672 775 aa8.35□□□□□ -1.07
NPHP3-204ENST00000469232 ETFBP38117 255 aa8.35□□□□□ -1.07
NPHP3-204ENST00000469232 VIPR2P41587 438 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms