RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 EAF1Q96JC9 268 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TWNKQ96RR1 684 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 TMEM120AQ9BXJ8 343 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 KRTAP9-3Q9BYQ3 159 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SLC2A11Q9BYW1 496 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 FRMD8P1Q9BZ68 369 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 SLC7A5P2Q9GIP4 190 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ZHX3Q9H4I2 956 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC86Q9H6F5 360 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PSTPIP2Q9H939 334 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GPN2Q9H9Y4 310 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A7Q9HAW7 530 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A10Q9HAW8 530 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 UGT1A8Q9HAW9 530 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 CCDC177Q9NQR7 707 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 MAN1C1Q9NR34 630 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GJB4Q9NTQ9 266 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 MKS1Q9NXB0 559 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GDAP2Q9NXN4 497 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 NINJ2Q9NZG7 142 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 COPG2Q9UBF2 871 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ASIC3Q9UHC3 531 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 GPN3Q9UHW5 284 aaPredicted RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 DAPK2Q9UIK4 370 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 VANGL2Q9ULK5 521 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PPM1HQ9ULR3 514 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PCDHA12Q9UN75 941 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 KCNJ14Q9UNX9 436 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 MRPS23Q9Y3D9 190 aaKnown RBP4.97□□□□□ -1.61
SF3B1-207ENST00000468925 PTCH2Q9Y6C5 1203 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ZNF536O15090 1300 aa4.97□□□□□ -1.61
SF3B1-207ENST00000468925 ROBO3Q96MS0 1386 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ARHGEF37A1IGU5 675 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TRIM64A6NGJ6 449 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SMAD7O15105 426 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SHOXO15266 292 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CLOCKO15516 846 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SGTAO43765 313 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CALUO43852 315 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 RNGTTO60942 597 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 MYO1DO94832 1006 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 RASGRP1O95267 797 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GH1P01241 217 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GSNP06396 782 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 LDHCP07864 332 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 DHRS4L1P0CG22 281 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TRAPPC2P0DI81 140 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TRAPPC2BP0DI82 140 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 NAT2P11245 290 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GZMAP12544 262 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ATP6V1B1P15313 513 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 UCHL3P15374 230 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CD9P21926 228 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 IL4RP24394 825 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 PCSK6P29122 969 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CD40LGP29965 261 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ADD2P35612 726 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GRK3P35626 688 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SLC16A2P36021 539 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CD96P40200 585 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 MAGEA4P43358 317 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 RGS7P49802 495 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GALCP54803 685 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 P2RX3P56373 397 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 DSTNP60981 165 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GPC5P78333 572 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ADAM17P78536 824 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 MYBPC1Q00872 1141 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 PTP4A2Q12974 167 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 NAB1Q13506 487 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 GALNT3Q14435 633 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 MORF4L2Q15014 288 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TMED2Q15363 201 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 OASLQ15646 514 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 DUSP7Q16829 419 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 EXOC3L4Q17RC7 722 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TIGD2Q4W5G0 525 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TM4SF20Q53R12 229 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 EARS2Q5JPH6 523 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF618Q5T7W0 954 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 KIAA0319Q5VV43 1072 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 DRICH1Q6PGQ1 229 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TMC5Q6UXY8 1006 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TAS2R42Q7RTR8 314 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ZNF571Q7Z3V5 609 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 PALB2Q86YC2 1186 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TBC1D10CQ8IV04 446 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CTAGE3PQ8IX95 158 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 IFNL3Q8IZI9 196 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 C4orf32Q8N8J7 132 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 ASCC1Q8N9N2 400 aaKnown RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 LEMD2Q8NC56 503 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 SLC35G2Q8TBE7 412 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 HCAR2Q8TDS4 363 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 PPP4R1Q8TF05 950 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 THAP3Q8WTV1 239 aaPredicted RBP4.96□□□□□ -1.62
SF3B1-207ENST00000468925 KBTBD7Q8WVZ9 684 aa4.96□□□□□ -1.62
SF3B1-207ENST00000468925 CELF1Q92879 486 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms