RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 REV3LO60673 3130 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 CCNB1P14635 433 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 TPSB2P20231 275 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 CDC25CP30307 473 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 CD68P34810 354 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 CCR2P41597 374 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 LMAN1P49257 510 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 RPS24P62847 133 aaKnown RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 TPSAB1Q15661 275 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 C5orf22Q49AR2 442 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 ADGRF1Q5T601 910 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 RBM23Q86U06 439 aaKnown RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 CAND1Q86VP6 1230 aaKnown RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 PDCD7Q8N8D1 485 aaKnown RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 HMCESQ96FZ2 354 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 ZNF419Q96HQ0 510 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 PRICKLE1Q96MT3 831 aaPredicted RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 PHACTR1Q9C0D0 580 aa21.06■□□□□ 0.96
TMEM53-207ENST00000468117 HELZP42694 1942 aaKnown RBP21.06■□□□□ 0.96
TMEM53-207ENST00000468117 RASA4BC9J798 803 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 RASA4O43374 803 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 MYZAPP0CAP1 466 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 GRIA1P42261 906 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 KRT71Q3SY84 523 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 CAPN12Q6ZSI9 719 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 TEKT5Q96M29 485 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 GCNAQ96QF7 691 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 VAT1Q99536 393 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 PBX4Q9BYU1 374 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 IPO11Q9UI26 975 aaKnown RBP21.05■□□□□ 0.96
TMEM53-207ENST00000468117 TRHDEQ9UKU6 1024 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 GOLGA6L10A6NI86 522 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 MATN3O15232 486 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 EIF3HO15372 352 aaKnown RBP eCLIP21.05■□□□□ 0.96
TMEM53-207ENST00000468117 SGSHP51688 502 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 KCTD16Q68DU8 428 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 ZNF534Q76KX8 674 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 CNTD1Q8N815 330 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 MCUQ8NE86 351 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 FBXO36Q8NEA4 188 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 PYROXD1Q8WU10 500 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 GORASP1Q9BQQ3 440 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 TMBIM4Q9HC24 238 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 RSPH14Q9UHP6 348 aa21.05■□□□□ 0.96
TMEM53-207ENST00000468117 SMIM23A6NLE4 172 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 GOLGA8KD6RF30 607 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 RRP9O43818 475 aaKnown RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 TSPAN3O60637 253 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 RAMP2O60895 175 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 NFKB1P19838 968 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 MAPKAPK2P49137 400 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 NUMBP49757 651 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 RABGAP1LQ5R372 815 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 ZNF697Q5TEC3 545 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 ZNF354CQ86Y25 554 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 LRRC49Q8IUZ0 686 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 AGGF1Q8N302 714 aaeCLIP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 TTC25Q96NG3 672 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 VPS18Q9P253 973 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 C5orf42Q9H799 3197 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 ARHGAP42A6NI28 874 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 GREM1O60565 184 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 IFI35P80217 286 aaPredicted RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 POLD3Q15054 466 aaPredicted RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 TIGD7Q6NT04 549 aaPredicted RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 RTL10Q7L3V2 364 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 ADGRD2Q7Z7M1 963 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 IGDCC3Q8IVU1 814 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 EPS8L3Q8TE67 593 aaKnown RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 TCEAL4Q96EI5 215 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 SLC46A2Q9BY10 475 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 FRMD8Q9BZ67 464 aaPredicted RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 GBA3Q9H227 469 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 DNMT3BQ9UBC3 853 aaKnown RBP21.04■□□□□ 0.96
TMEM53-207ENST00000468117 CHMP2BQ9UQN3 213 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 TTLL3Q9Y4R7 772 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 HCFC2Q9Y5Z7 792 aa21.04■□□□□ 0.96
TMEM53-207ENST00000468117 TRAV19A0A0A6YYK7 116 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 TLDC2A0PJX2 215 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 J3KR12 359 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 PTPN2P17706 415 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 ELK3P41970 407 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 SLCO1A2P46721 670 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 GYS2P54840 703 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 ITPRIPL1Q6GPH6 555 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 PDE12Q6L8Q7 609 aaKnown RBP21.03■□□□□ 0.96
TMEM53-207ENST00000468117 SHKBP1Q8TBC3 707 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 IL12RB2Q99665 862 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 VPS37BQ9H9H4 285 aa21.03■□□□□ 0.96
TMEM53-207ENST00000468117 SSTR1P30872 391 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 ACVRL1P37023 503 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 CDH4P55283 916 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 GPX6P59796 221 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 SLC7A9P82251 487 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 LONRF1Q17RB8 773 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 OTOP3Q7RTS5 596 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 ARNTL2Q8WYA1 636 aa21.02■□□□□ 0.96
TMEM53-207ENST00000468117 SMG9Q9H0W8 520 aaKnown RBP21.02■□□□□ 0.96
TMEM53-207ENST00000468117 NKX2-4Q9H2Z4 354 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms