RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 HS3ST4Q9Y661 456 aa10.67□□□□□ -0.7
SSR3-205ENST00000467789 CEP295Q9C0D2 2601 aa10.67□□□□□ -0.7
SSR3-205ENST00000467789 LRRC72A6NJI9 287 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 ALOX15BO15296 676 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 SIN3BO75182 1162 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 PAGE1O75459 146 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 GJB3O75712 270 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 TRIM16O95361 564 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 PDGFRAP16234 1089 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 C5AR1P21730 350 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 CD27P26842 260 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 MAOBP27338 520 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 SOX5P35711 763 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 STAT1P42224 750 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 GRIA4P48058 902 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 SULT1E1P49888 294 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 JAM2P57087 298 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 RNASE9P60153 205 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 POLR2FP61218 127 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 NOMO3P69849 1222 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 KRT83P78385 493 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 CDR2Q01850 454 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 GRIK2Q13002 908 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 TEAD4Q15561 434 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 TAF3Q5VWG9 929 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 CXorf57Q6NSI4 855 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 MMS22LQ6ZRQ5 1243 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 SETD3Q86TU7 594 aaPredicted RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 FAM124AQ86V42 546 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 DHX40Q8IX18 779 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 APCDD1Q8J025 514 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 ZCCHC9Q8N567 271 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 CNTNAP3BQ96NU0 1288 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 HAPLN3Q96S86 360 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 OMDQ99983 421 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 FEM1AQ9BSK4 669 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 C2orf49Q9BVC5 232 aaPredicted RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 CNTNAP3Q9BZ76 1288 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 TKTL2Q9H0I9 626 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 MIR1-1HGQ9H1L0 117 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 RETREG1Q9H6L5 497 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 FANCLQ9NW38 375 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 FBXL12Q9NXK8 326 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 LIMA1Q9UHB6 759 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 SLCO3A1Q9UIG8 710 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 SLC25A13Q9UJS0 675 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 NOCTQ9UK39 431 aaKnown RBP10.66□□□□□ -0.7
SSR3-205ENST00000467789 VANGL2Q9ULK5 521 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 NUMA1Q14980 2115 aa10.66□□□□□ -0.7
SSR3-205ENST00000467789 DOCK4Q8N1I0 1966 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 CXorf51AA0A1B0GTR3 108 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 LGALS16A8MUM7 142 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 TTC34A8MYJ7 566 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 GIPC1O14908 333 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 ATP9BO43861 1147 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 DFNA5O60443 496 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 ENDOD1O94919 500 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 CYP1A1P04798 512 aaPredicted RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 MMEP08473 750 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 CD59P13987 128 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 CDK11BP21127 795 aaKnown RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 MMP8P22894 467 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 SLC8A1P32418 973 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 CTSOP43234 321 aaPredicted RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 COPB1P53618 953 aaKnown RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 CCDC183Q5T5S1 534 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 OTUD1Q5VV17 481 aaPredicted RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 FAM46CQ5VWP2 391 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 ZNF783Q6ZMS7 281 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 BNIPLQ7Z465 357 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 DEFB124Q8NES8 71 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 NEK11Q8NG66 645 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 GANCQ8TET4 914 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 SNX19Q92543 992 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 PTPRN2Q92932 1015 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 IGSF8Q969P0 613 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 SKA1Q96BD8 255 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 BIRC7Q96CA5 298 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 ALG14Q96F25 216 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 RPL10LQ96L21 214 aaKnown RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 CCDC114Q96M63 670 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 ERGIC2Q96RQ1 377 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 FAM129BQ96TA1 746 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 NAT10Q9H0A0 1025 aaKnown RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 SIK2Q9H0K1 926 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 C6orf106Q9H6K1 298 aaPredicted RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 FAM207AQ9NSI2 230 aaPredicted RBP10.65□□□□□ -0.7
SSR3-205ENST00000467789 TMEM59LQ9UK28 342 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 VPS28Q9UK41 221 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 SIK3Q9Y2K2 1263 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 PCDHB3Q9Y5E6 796 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 PCDHGB2Q9Y5G2 931 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 OR51B4Q9Y5P0 310 aa10.65□□□□□ -0.7
SSR3-205ENST00000467789 IGLV3-10A0A075B6K4 115 aa10.64□□□□□ -0.71
SSR3-205ENST00000467789 DRGXA6NNA5 263 aa10.64□□□□□ -0.71
SSR3-205ENST00000467789 MID1O15344 667 aa10.64□□□□□ -0.71
SSR3-205ENST00000467789 SLC7A4O43246 635 aa10.64□□□□□ -0.71
SSR3-205ENST00000467789 RNASEH2AO75792 299 aaKnown RBP10.64□□□□□ -0.71
SSR3-205ENST00000467789 GFPT2O94808 682 aa10.64□□□□□ -0.71
SSR3-205ENST00000467789 ADCY5O95622 1261 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms