RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TFR2Q9UP52 801 aa11.34□□□□□ -0.59
MSH5-212ENST00000467319 HS3ST2Q9Y278 367 aa11.34□□□□□ -0.59
MSH5-212ENST00000467319 CXorf51AA0A1B0GTR3 108 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 WASH3PC4AMC7 463 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 PJA2O43164 708 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 CREB3O43889 395 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 ZMPSTE24O75844 475 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 IPO7O95373 1038 aaKnown RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 RARAP10276 462 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 GOT1P17174 413 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 GABRG2P18507 467 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 NBL1P41271 181 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 WASP42768 502 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 HCAR3P49019 387 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 STK19P49842 368 aaPredicted RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 NRLP54845 237 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 NHLH1Q02575 133 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 GNA12Q03113 381 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 HNRNPA1L2Q32P51 320 aaKnown RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 FNDC3BQ53EP0 1204 aaKnown RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 BOLA3Q53S33 107 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 KCNT1Q5JUK3 1230 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 AFMIDQ63HM1 303 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 ANO7Q6IWH7 933 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 C11orf63Q6NUN7 778 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 LONP2Q86WA8 852 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 UMODL1-AS1Q8N2C9 162 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 NPWQ8N729 165 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 OR7D4Q8NG98 312 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 FRS2Q8WU20 508 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 C2orf49Q9BVC5 232 aaPredicted RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 ACE2Q9BYF1 805 aaPredicted RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 KLC2Q9H0B6 622 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 MUC3BQ9H195 1237 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 PCDH18Q9HCL0 1135 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 CWC15Q9P013 229 aaKnown RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 RCOR3Q9P2K3 495 aaPredicted RBP11.33□□□□□ -0.6
MSH5-212ENST00000467319 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 SALL4Q9UJQ4 1053 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 VPS28Q9UK41 221 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 ERVW-1Q9UQF0 538 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 USP34Q70CQ2 3546 aa11.33□□□□□ -0.6
MSH5-212ENST00000467319 OTOGLQ3ZCN5 2332 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 TCRBV21S2A2A0A5A6 115 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 PROB1E7EW31 1015 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 EEF2KO00418 725 aaKnown RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 DCLK1O15075 740 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 ATP9BO43861 1147 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 BUB1BO60566 1050 aaPredicted RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 SNAP91O60641 907 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 RAMP2O60895 175 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 HLA-EP13747 358 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 NDUFV2P19404 249 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 ETFBP38117 255 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 FNTBP49356 437 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 MRE11P49959 708 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 COPAP53621 1224 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 ARF5P84085 180 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 CCZ1BP86790 482 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 CCZ1P86791 482 aaPredicted RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 MESDQ14696 234 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 STARD3Q14849 445 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 PARP15Q460N3 678 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 LRRC38Q5VT99 294 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 ZC3H14Q6PJT7 736 aaKnown RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 ARHGAP12Q8IWW6 846 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 HSPH1Q92598 858 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 ARHGEF2Q92974 986 aaKnown RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 FAF2Q96CS3 445 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 MRGPRX1Q96LB2 322 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 CSPG4P5Q96PW8 444 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 PPP1R9BQ96SB3 815 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 DESI2Q9BSY9 194 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 LACRTQ9GZZ8 138 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 MKRN2Q9H000 416 aaKnown RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 MAGEH1Q9H213 219 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 LRRC19Q9H756 370 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 CATSPERBQ9H7T0 1116 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 ZWILCHQ9H900 591 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 FBRSQ9HAH7 460 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 POLMQ9NP87 494 aaPredicted RBP11.32□□□□□ -0.6
MSH5-212ENST00000467319 DNAI1Q9UI46 699 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 PLA2G4CQ9UP65 541 aa11.32□□□□□ -0.6
MSH5-212ENST00000467319 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 TTC34A8MYJ7 566 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ZNF487B1APH4 448 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 H3BRJ5 948 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 AXIN1O15169 862 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ARHGAP6O43182 974 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 EPHX1P07099 455 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 KRT7P08729 469 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 SRCP12931 536 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ERCC2P18074 760 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 GLDCP23378 1020 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 IL4RP24394 825 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 ACVRL1P37023 503 aa11.31□□□□□ -0.6
MSH5-212ENST00000467319 SLC1A1P43005 524 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms