RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ADGRF4Q8IZF3 695 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 PAQR4Q8N4S7 273 aaPredicted RBP4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 ZFPM2Q8WW38 1151 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 CHMP4AQ9BY43 222 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 THSD1Q9NS62 852 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 LUZP4Q9P127 313 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 KCND3Q9UK17 655 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 PCDHA10Q9Y5I2 948 aa4.93□□□□□ -1.62
PRPF40A-205ENST00000467114 KIR2DS5A0A0G2JLQ3 304 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 PLEKHD1A6NEE1 506 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 AGAP5A6NIR3 686 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 KIR2DS3K7RE56 304 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 ALDOAP04075 364 aaKnown RBP4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 MT3P25713 68 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 RCAN1P53805 252 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 ADPRHP54922 357 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 P2RX3P56373 397 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 PTGR1Q14914 329 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 TAF5Q15542 800 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 ODF3L2Q3SX64 289 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 KIAA1755Q5JYT7 1200 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 ASPHD1Q5U4P2 390 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 TMEM88Q6PEY1 159 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 TMEM199Q8N511 208 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 PTGR2Q8N8N7 351 aaPredicted RBP4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 ANKRD42Q8N9B4 389 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 CSGALNACT1Q8TDX6 532 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 CPT1BQ92523 772 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 CCT6BQ92526 530 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 KTI12Q96EK9 354 aaPredicted RBP4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 MEIS3Q99687 375 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 PIMREGQ9BSJ6 248 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 FZD3Q9NPG1 666 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 KIF17Q9P2E2 1029 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 DGKBQ9Y6T7 804 aa4.92□□□□□ -1.62
PRPF40A-205ENST00000467114 LOC102724159A0A0B4J2E5 919 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 E7EVH7 732 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 PLA2G2AP14555 144 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 PPATQ06203 517 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 PPFIA1Q13136 1202 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 PWP2Q15269 919 aaKnown RBP4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 DLGAP5Q15398 846 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 ZNF569Q5MCW4 686 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 FBXO47Q5MNV8 452 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 PDXDC1Q6P996 788 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 Q6ZTC4 211 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 TRAPPC11Q7Z392 1133 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 EXOC8Q8IYI6 725 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 ARL14EPQ8N8R7 260 aaPredicted RBP4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 SRFBP1Q8NEF9 429 aaKnown RBP4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 KAT2BQ92831 832 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 C3orf49Q96BT1 292 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 SFXN1Q9H9B4 322 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 ERVK-5Q9HDB9 667 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 RASSF1Q9NS23 344 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 SAGE1Q9NXZ1 904 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 ICKQ9UPZ9 632 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 LMTK3Q96Q04 1460 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 EMSYQ7Z589 1322 aa4.91□□□□□ -1.62
PRPF40A-205ENST00000467114 HMX3A6NHT5 357 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 C17orf100A8MU93 164 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 KRT86O43790 486 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 SLC3A2P08195 630 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 ALDOCP09972 364 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 ACP5P13686 325 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 CHN1P15882 459 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 TGM2P21980 687 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 MCM2P49736 904 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 HYAL1Q12794 435 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 KRT81Q14533 505 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 PGM5Q15124 567 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 SMTNL2Q2TAL5 461 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 GLE1Q53GS7 698 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 PIK3CD-AS1Q5SR53 167 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 NUGGCQ68CJ6 796 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 RINLQ6ZS11 566 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 SYT13Q7L8C5 426 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 FTSJ3Q8IY81 847 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 HERVK_113Q902F9 699 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 LTV1Q96GA3 475 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 FAM84BQ96KN1 310 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 PAGR1Q9BTK6 254 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 HTATIP2Q9BUP3 242 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 FRMD8Q9BZ67 464 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 TAF1DQ9H5J8 278 aaPredicted RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 PLEKHA2Q9HB19 425 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 SEPSECSQ9HD40 501 aaKnown RBP4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 TMLHEQ9NVH6 421 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 PCDHA7Q9UN72 937 aa4.9□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3DA0A087WVF3 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3IA0A087WXS9 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3EA0A087X179 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3KA0A087X1G2 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3BA6NDS4 549 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3FA6NER0 549 aaPredicted RBP4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 NPIPB13A6NJU9 1138 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 NPIPB5A8MRT5 1133 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 KCNJ18B7U540 433 aa4.89□□□□□ -1.63
PRPF40A-205ENST00000467114 TBC1D3LB9A6J9 549 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms