RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 HAUS1Q96CS2 278 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 HMCESQ96FZ2 354 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 CAPZA3Q96KX2 299 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 XPO6Q96QU8 1125 aaKnown RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 FEM1AQ9BSK4 669 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ACE2Q9BYF1 805 aaPredicted RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 MAGEH1Q9H213 219 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ABCB8Q9NUT2 735 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 DNAJC17Q9NVM6 304 aaKnown RBP11.42□□□□□ -0.58
VCP-204ENST00000466100 CDC23Q9UJX2 597 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 MRFAP1Q9Y605 127 aa11.42□□□□□ -0.58
VCP-204ENST00000466100 ANKRD36A6QL64 1941 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 SPECC1L-ADORA2AF8WAN1 911 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 ZMPSTE24O75844 475 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 URI1O94763 535 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 PEX11BO96011 259 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 PABPC1P11940 636 aaKnown RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 GARSP41250 739 aaKnown RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 DGKGP49619 791 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 OXCT1P55809 520 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 OTUD4Q01804 1114 aaKnown RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 PFKPQ01813 784 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 SERINC3Q13530 473 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 SLC12A1Q13621 1099 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 POLD3Q15054 466 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 OASLQ15646 514 aaKnown RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 CYP1B1Q16678 543 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 GEN1Q17RS7 908 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 LONRF2Q1L5Z9 754 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 FUT11Q495W5 492 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 PITRM1Q5JRX3 1037 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 RNF219Q5W0B1 726 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 TMEM215Q68D42 235 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 GRAMD4Q6IC98 578 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 ARHGAP36Q6ZRI8 547 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 ADAT2Q7Z6V5 191 aaKnown RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 ADIPOR2Q86V24 386 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 SFTPA1Q8IWL2 248 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 APCDD1Q8J025 514 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 CCDC33Q8N5R6 958 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 TERB1Q8NA31 727 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 C12orf50Q8NA57 414 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 DCAF4L2Q8NA75 395 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 SLC35B2Q8TB61 432 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 HDAC11Q96DB2 347 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 QKIQ96PU8 341 aaKnown RBP eCLIP11.41□□□□□ -0.58
VCP-204ENST00000466100 NAP1L3Q99457 506 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 FAM118BQ9BPY3 351 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 C8orf33Q9H7E9 229 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 PDFQ9HBH1 243 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 HEBP1Q9NRV9 189 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 KIAA1522Q9P206 1035 aaPredicted RBP11.41□□□□□ -0.58
VCP-204ENST00000466100 DEC1Q9P2X7 70 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 RNF14Q9UBS8 474 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 GGA2Q9UJY4 613 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 HEY1Q9Y5J3 304 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 PIAS3Q9Y6X2 628 aa11.41□□□□□ -0.58
VCP-204ENST00000466100 TECTAO75443 2155 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 ARHGAP42A6NI28 874 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 LIASO43766 372 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 MAFKO60675 156 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 GLULP15104 373 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 MX2P20592 715 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 GLDCP23378 1020 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 ETFBP38117 255 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 PAPOLAP51003 745 aaKnown RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 KDSRQ06136 332 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 ZNF33AQ06730 810 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 PPIDQ08752 370 aaKnown RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 XRCC4Q13426 336 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 PDK1Q15118 436 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 PRKD1Q15139 912 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 WHAMMP3Q1A5X7 153 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 DRICH1Q6PGQ1 229 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 RALGPS2Q86X27 583 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 LRRC49Q8IUZ0 686 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.4□□□□□ -0.58
VCP-204ENST00000466100 TTC13Q8NBP0 860 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 WFIKKN2Q8TEU8 576 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 MAIP1Q8WWC4 291 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 ATG4AQ8WYN0 398 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 P3H4Q92791 437 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 EZH1Q92800 747 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 FATE1Q969F0 183 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 NKD2Q969F2 451 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 TTC17Q96AE7 1141 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 MSANTD3Q96H12 275 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 ZNF419Q96HQ0 510 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 NECAB3Q96P71 396 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 TSGA13Q96PP4 275 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 FRMD8P1Q9BZ68 369 aaPredicted RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 MUC3BQ9H195 1237 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 FBRSL1Q9HCM7 1045 aaKnown RBP11.4□□□□□ -0.58
VCP-204ENST00000466100 VPS51Q9UID3 782 aa11.4□□□□□ -0.58
VCP-204ENST00000466100 BPTFQ12830 3046 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 A0A0A0MRY4 1105 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 CXorf51AA0A1B0GTR3 108 aa11.39□□□□□ -0.59
VCP-204ENST00000466100 HACD1B0YJ81 288 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms