RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SHC2P98077 582 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 CDK18Q07002 472 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 MTA1Q13330 715 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 PDCLQ13371 301 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 THOC5Q13769 683 aaKnown RBP4.74□□□□□ -1.65
LRCH3-211ENST00000466054 ANKRD1Q15327 319 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 DHRS13Q6UX07 377 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 RBMXL3Q8N7X1 1067 aaKnown RBP4.74□□□□□ -1.65
LRCH3-211ENST00000466054 EXD3Q8N9H8 876 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 OR52N4Q8NGI2 321 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 CEP70Q8NHQ1 597 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 USP13Q92995 863 aaPredicted RBP4.74□□□□□ -1.65
LRCH3-211ENST00000466054 VCPIP1Q96JH7 1222 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 COG8Q96MW5 612 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 CTAGE1Q96RT6 745 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 CHMP4AQ9BY43 222 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 PLEKHA2Q9HB19 425 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 SLC22A11Q9NSA0 550 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 PGAP2Q9UHJ9 254 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 GTF2A1LQ9UNN4 478 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 RCE1Q9Y256 329 aa4.74□□□□□ -1.65
LRCH3-211ENST00000466054 MCIDASD6RGH6 385 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 HOXA7P31268 230 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-211ENST00000466054 OAZ1P54368 228 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 YPEL5P62699 121 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 GHRHRQ02643 423 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 ALKBH1Q13686 389 aaKnown RBP4.73□□□□□ -1.65
LRCH3-211ENST00000466054 ZNF484Q5JVG2 852 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 LRRTM4Q86VH4 590 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 HERVK_113Q902F9 699 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 TWNKQ96RR1 684 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 ZNF347Q96SE7 839 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 TRMOQ9BU70 441 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 OSBPL5Q9H0X9 879 aaPredicted RBP4.73□□□□□ -1.65
LRCH3-211ENST00000466054 TXNRD2Q9NNW7 524 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 RIC8AQ9NPQ8 531 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 SAGE1Q9NXZ1 904 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 IPO11Q9UI26 975 aaKnown RBP4.73□□□□□ -1.65
LRCH3-211ENST00000466054 GJD2Q9UKL4 321 aa4.73□□□□□ -1.65
LRCH3-211ENST00000466054 LRRFIP2Q9Y608 721 aaKnown RBP4.73□□□□□ -1.65
LRCH3-211ENST00000466054 NCAM2O15394 837 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 CCNT1O60563 726 aaKnown RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 TSPAN3O60637 253 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 CRYABP02511 175 aaKnown RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 ACP5P13686 325 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 ST6GAL1P15907 406 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 HOXB9P17482 250 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 PRPH2P23942 346 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 MAPK9P45984 424 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 RPS13P62277 151 aaKnown RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 B4GALNT1Q00973 533 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 CFHR1Q03591 330 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 TLE2Q04725 743 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 EARS2Q5JPH6 523 aaKnown RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 LIPMQ5VYY2 423 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 LVRNQ6Q4G3 990 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 KIAA1324Q6UXG2 1013 aaKnown RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 SYNE3Q6ZMZ3 975 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 DEF8Q6ZN54 512 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 C9orf47Q6ZRZ4 202 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 BBS12Q6ZW61 710 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 TBATAQ96M53 351 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 ARHGAP39Q9C0H5 1083 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 MLXIPLQ9NP71 852 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 POT1Q9NUX5 634 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 RRN3Q9NYV6 651 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 DTX4Q9Y2E6 619 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 DNAJC16Q9Y2G8 782 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 PKP3Q9Y446 797 aa4.72□□□□□ -1.65
LRCH3-211ENST00000466054 ZNF335Q9H4Z2 1342 aaPredicted RBP4.72□□□□□ -1.65
LRCH3-211ENST00000466054 SLC22A23A1A5C7 686 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 NPIPB13A6NJU9 1138 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 C2CD4BA6NLJ0 364 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 NPIPB5A8MRT5 1133 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 KCNJ18B7U540 433 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 NPIPB4C9JG80 1138 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 STX16-NPEPL1H3BU86 382 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 STX16O14662 325 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 CSF1P09603 554 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 CKMT1AP12532 417 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 PRF1P14222 555 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 PKMP14618 531 aaKnown RBP4.71□□□□□ -1.66
LRCH3-211ENST00000466054 ATP5F1P24539 256 aaPredicted RBP4.71□□□□□ -1.66
LRCH3-211ENST00000466054 STAT1P42224 750 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 RPS6KA3P51812 740 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 UBE3AQ05086 875 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 SLC12A1Q13621 1099 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 SLC9C1Q4G0N8 1177 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 LRRC24Q50LG9 513 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 CBWD5Q5RIA9 395 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 C10orf76Q5T2E6 689 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 DENND1BQ6P3S1 775 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 RTL10Q7L3V2 364 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 MDGA2Q7Z553 956 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 TMEM200AQ86VY9 491 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 ANKRD44Q8N8A2 993 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 CLPBQ9H078 707 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 PDP2Q9P2J9 529 aa4.71□□□□□ -1.66
LRCH3-211ENST00000466054 SLC25A13Q9UJS0 675 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms