RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 KLRK1P26718 216 aa5.55□□□□□ -1.52
SMC4-205ENST00000465563 CMASQ8NFW8 434 aaPredicted RBP5.55□□□□□ -1.52
SMC4-205ENST00000465563 TMEM120AQ9BXJ8 343 aa5.55□□□□□ -1.52
SMC4-205ENST00000465563 ZNF556Q9HAH1 456 aa5.55□□□□□ -1.52
SMC4-205ENST00000465563 PLEKHB1Q9UF11 243 aaPredicted RBP5.55□□□□□ -1.52
SMC4-205ENST00000465563 ERVV-2B6SEH9 535 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 KIF28PB7ZC32 967 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 FCGR1AP12314 374 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 NPPBP16860 134 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 HSPA7P48741 367 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 RGS19P49795 217 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 PDLIM4P50479 330 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 PMS2P54278 862 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 FAM3BP58499 235 aaPredicted RBP5.54□□□□□ -1.52
SMC4-205ENST00000465563 RHAGQ02094 409 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 MPEG1Q2M385 716 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 TDRD12Q587J7 1177 aaKnown RBP5.54□□□□□ -1.52
SMC4-205ENST00000465563 IZUMO3Q5VZ72 239 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 SPSB3Q6PJ21 355 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 Q6ZSV7 163 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 ZNF367Q7RTV3 350 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 ANKS1BQ7Z6G8 1248 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 ZNF329Q86UD4 541 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 RIPOR3Q96MK2 946 aa5.54□□□□□ -1.52
SMC4-205ENST00000465563 SORBS1Q9BX66 1292 aaKnown RBP5.54□□□□□ -1.52
SMC4-205ENST00000465563 ACTR5Q9H9F9 607 aaPredicted RBP5.54□□□□□ -1.52
SMC4-205ENST00000465563 A0A087WYN8 130 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 SMTNL1A8MU46 457 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 RASA4BC9J798 803 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 STMND1H3BQB6 276 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 RASA4O43374 803 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 PPP1R3DO95685 299 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 MYL3P08590 195 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 TRIM27P14373 513 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 AKT1P31749 480 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 ERVFC1-1P60608 527 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 SEC61A1P61619 476 aaKnown RBP5.53□□□□□ -1.52
SMC4-205ENST00000465563 KIF5AQ12840 1032 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 C8orf82Q6P1X6 216 aaPredicted RBP5.53□□□□□ -1.52
SMC4-205ENST00000465563 CREB3L2Q70SY1 520 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 C16orf82Q7Z2V1 217 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 C11orf96Q7Z7L8 435 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 TMEM200AQ86VY9 491 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 CCAR1Q8IX12 1150 aaKnown RBP5.53□□□□□ -1.52
SMC4-205ENST00000465563 OR2C3Q8N628 320 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 TMEM217Q8N7C4 229 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 LRRC57Q8N9N7 239 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 IPO4Q8TEX9 1081 aaKnown RBP5.53□□□□□ -1.52
SMC4-205ENST00000465563 CLEC4CQ8WTT0 213 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 ARL15Q9NXU5 204 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 KLHL42Q9P2K6 505 aa5.53□□□□□ -1.52
SMC4-205ENST00000465563 PRSS47A8MTI9 375 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 PIP5K1BO14986 540 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 LINC01565O15544 149 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 GRID2O43424 1007 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 GAS8-AS1O95177 125 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 CLCN5P51795 746 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 ZBTB16Q05516 673 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 RNASELQ05823 741 aaKnown RBP5.52□□□□□ -1.53
SMC4-205ENST00000465563 C9orf57Q5W0N0 161 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 SLC30A9Q6PML9 568 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 ARMC9Q7Z3E5 817 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 CLIP4Q8N3C7 705 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 FAM110DQ8TAY7 271 aaPredicted RBP5.52□□□□□ -1.53
SMC4-205ENST00000465563 APOLD1Q96LR9 279 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 MECRQ9BV79 373 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 FRMD8Q9BZ67 464 aaPredicted RBP5.52□□□□□ -1.53
SMC4-205ENST00000465563 SLC39A10Q9ULF5 831 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 RAP2CQ9Y3L5 183 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 PKP3Q9Y446 797 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 CKAP5Q14008 2032 aa5.52□□□□□ -1.53
SMC4-205ENST00000465563 TCRBV7S3A2A0A539 114 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 MBD3L5A6NJ08 208 aaPredicted RBP5.51□□□□□ -1.53
SMC4-205ENST00000465563 PLA2G6O60733 806 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 LARGE1O95461 756 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 ZBTB11O95625 1053 aaPredicted RBP5.51□□□□□ -1.53
SMC4-205ENST00000465563 TM4SF4P48230 202 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 CYP2J2P51589 502 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 COASYQ13057 564 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 PLK5Q496M5 336 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 VWA5B1Q5TIE3 1220 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 FOXP4Q8IVH2 680 aaPredicted RBP5.51□□□□□ -1.53
SMC4-205ENST00000465563 PJA1Q8NG27 643 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 OR14A16Q8NHC5 309 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 RTP4Q96DX8 246 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 ZNF333Q96JL9 665 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 PRPF18Q99633 342 aaKnown RBP5.51□□□□□ -1.53
SMC4-205ENST00000465563 STK33Q9BYT3 514 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 KLHL31Q9H511 634 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 CERS4Q9HA82 394 aa5.51□□□□□ -1.53
SMC4-205ENST00000465563 SLC38A8A6NNN8 435 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 ASAP2O43150 1006 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 DNPH1O43598 174 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 HOXB9P17482 250 aaPredicted RBP5.5□□□□□ -1.53
SMC4-205ENST00000465563 AVPR1AP37288 418 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 TMPRSS3P57727 454 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 SF3A3Q12874 501 aaKnown RBP eCLIP5.5□□□□□ -1.53
SMC4-205ENST00000465563 PLCB4Q15147 1175 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 LONRF1Q17RB8 773 aa5.5□□□□□ -1.53
SMC4-205ENST00000465563 TMEM71Q6P5X7 295 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms