RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 XPO7Q9UIA9 1087 aaKnown RBP18.27■□□□□ 0.52
COL7A1-205ENST00000465238 NENFQ9UMX5 172 aa18.27■□□□□ 0.52
COL7A1-205ENST00000465238 WASF3Q9UPY6 502 aa18.27■□□□□ 0.52
COL7A1-205ENST00000465238 TMEM191CA6NGB0 347 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 OPHN1O60890 802 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 PAGE1O75459 146 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 GNSP15586 552 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 TACR2P21452 398 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 PSMA2P25787 234 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 SLC6A4P31645 630 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 ZNF234Q14588 700 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 ARL13BQ3SXY8 428 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 MS4A13Q5J8X5 152 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 PIK3R6Q5UE93 754 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 PIP4P1Q86T03 277 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 FAM131BQ86XD5 332 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 TMTC1Q8IUR5 882 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 LGI2Q8N0V4 545 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 MINDY1Q8N5J2 469 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 CTNNBL1Q8WYA6 563 aaPredicted RBP18.26■□□□□ 0.51
COL7A1-205ENST00000465238 CIPCQ9C0C6 399 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 FSCN3Q9NQT6 498 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 WSB2Q9NYS7 404 aaPredicted RBP18.26■□□□□ 0.51
COL7A1-205ENST00000465238 CLEC4EQ9ULY5 219 aa18.26■□□□□ 0.51
COL7A1-205ENST00000465238 IGF2RP11717 2491 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 F5H5T6 163 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 CCP110O43303 1012 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 TBL1XO60907 577 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 CYP1A2P05177 515 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 PROS1P07225 676 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 HOXD9P28356 352 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-205ENST00000465238 OXTRP30559 389 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 ACBD5Q5T8D3 534 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-205ENST00000465238 SCYL2Q6P3W7 929 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 TMPRSS6Q8IU80 811 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 CCDC117Q8IWD4 279 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-205ENST00000465238 CCDC170Q8IYT3 715 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 HJURPQ8NCD3 748 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-205ENST00000465238 PRCCQ92733 491 aaPredicted RBP18.25■□□□□ 0.51
COL7A1-205ENST00000465238 SIPA1Q96FS4 1042 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 TOE1Q96GM8 510 aaKnown RBP18.25■□□□□ 0.51
COL7A1-205ENST00000465238 SIK2Q9H0K1 926 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 STIM2Q9P246 746 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 CFAP47Q6ZTR5 3102 aa18.25■□□□□ 0.51
COL7A1-205ENST00000465238 RNF8O76064 485 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 CYLC1P35663 651 aaPredicted RBP18.24■□□□□ 0.51
COL7A1-205ENST00000465238 TPMTP51580 245 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 HDAC4P56524 1084 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 OGDHQ02218 1023 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 PLEKHG6Q3KR16 790 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 RAB6CQ53S08 254 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 RABGAP1LQ5R372 815 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 MPP7Q5T2T1 576 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 TMEM215Q68D42 235 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 SERPINA13PQ6UXR4 307 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 UNQ6494/PRO21346Q6UXR6 183 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 CADM4Q8NFZ8 388 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 WFIKKN2Q8TEU8 576 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 FNIP1Q8TF40 1166 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 DNASE2BQ8WZ79 361 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 NUP85Q9BW27 656 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 PACSIN1Q9BY11 444 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 RAB6CQ9H0N0 254 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 DNAAF2Q9NVR5 837 aaKnown RBP18.24■□□□□ 0.51
COL7A1-205ENST00000465238 HS3ST4Q9Y661 456 aa18.24■□□□□ 0.51
COL7A1-205ENST00000465238 AKAP13Q12802 2813 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 MEI4A8MW99 385 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 IGLV3-19P01714 112 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 EPHX1P07099 455 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 TMEM253P0C7T8 217 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 ACADMP11310 421 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 PRKCHP24723 683 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 HLA-FP30511 346 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 ADRA1BP35368 520 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 SGSHP51688 502 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 COPAP53621 1224 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 SLC14A1Q13336 389 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 AUHQ13825 339 aaKnown RBP18.23■□□□□ 0.51
COL7A1-205ENST00000465238 SPA17Q15506 151 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 LRRC31Q6UY01 552 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 CFAP52Q8N1V2 620 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 ZNF557Q8N988 423 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-205ENST00000465238 SORCS1Q8WY21 1168 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 ARHGEF26Q96DR7 871 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 C1orf74Q96LT6 269 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 RPRD1AQ96P16 312 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-205ENST00000465238 HAPLN3Q96S86 360 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 PRMT1Q99873 361 aaKnown RBP18.23■□□□□ 0.51
COL7A1-205ENST00000465238 BAG1Q99933 345 aaPredicted RBP18.23■□□□□ 0.51
COL7A1-205ENST00000465238 NCAPGQ9BPX3 1015 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 GPR174Q9BXC1 333 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 CTTNBP2NLQ9P2B4 639 aa18.23■□□□□ 0.51
COL7A1-205ENST00000465238 IPO7O95373 1038 aaKnown RBP18.22■□□□□ 0.51
COL7A1-205ENST00000465238 FECHP22830 423 aa18.22■□□□□ 0.51
COL7A1-205ENST00000465238 MAGEA1P43355 309 aa18.22■□□□□ 0.51
COL7A1-205ENST00000465238 GSDMDP57764 484 aa18.22■□□□□ 0.51
COL7A1-205ENST00000465238 RPS24P62847 133 aaKnown RBP18.22■□□□□ 0.51
COL7A1-205ENST00000465238 SIM1P81133 766 aaPredicted RBP18.22■□□□□ 0.51
COL7A1-205ENST00000465238 HNRNPDQ14103 355 aaKnown RBP18.22■□□□□ 0.51
COL7A1-205ENST00000465238 FBXL22Q6P050 247 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms