RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 RPS9P46781 194 aaKnown RBP12.18□□□□□ -0.46
APTX-213ENST00000465003 AIF1P55008 147 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 NRG1Q02297 640 aaPredicted RBP12.18□□□□□ -0.46
APTX-213ENST00000465003 DPYSL3Q14195 570 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 BOLA3Q53S33 107 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 IL31Q6EBC2 164 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 AADACL2Q6P093 401 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 ARHGAP36Q6ZRI8 547 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.18□□□□□ -0.46
APTX-213ENST00000465003 RTL3Q8N8U3 475 aaKnown RBP12.18□□□□□ -0.46
APTX-213ENST00000465003 HMCESQ96FZ2 354 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 MYO19Q96H55 970 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 CD93Q9NPY3 652 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 TMEM248Q9NWD8 314 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
APTX-213ENST00000465003 PRDM4Q9UKN5 801 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 PYCARDQ9ULZ3 195 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 OR51B4Q9Y5P0 310 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 USP27XA6NNY8 438 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 TTC34A8MYJ7 566 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 H0Y858 1186 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 TNFRSF4P43489 277 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 ARSEP51690 589 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 GNA12Q03113 381 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 MTA1Q13330 715 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 DPYSQ14117 519 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 DMC1Q14565 340 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 TCEAL1Q15170 157 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 FBXO43Q4G163 708 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 C6orf118Q5T5N4 469 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 ANO7Q6IWH7 933 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 SERPINA13PQ6UXR4 307 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 KIAA0907Q7Z7F0 614 aaPredicted RBP12.18□□□□□ -0.46
APTX-213ENST00000465003 C1orf210Q8IVY1 113 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 LRRC57Q8N9N7 239 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 EXOC4Q96A65 974 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 ATP13A1Q9HD20 1204 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 VPS51Q9UID3 782 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 STON1Q9Y6Q2 735 aa12.18□□□□□ -0.46
APTX-213ENST00000465003 DFFAO00273 331 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 SMAD6O43541 496 aaKnown RBP12.17□□□□□ -0.46
APTX-213ENST00000465003 RAMP2O60895 175 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 EPHX1P07099 455 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 DLDP09622 509 aaKnown RBP12.17□□□□□ -0.46
APTX-213ENST00000465003 HOXB2P14652 356 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 ARL4AP40617 200 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 HADHBP55084 474 aaKnown RBP12.17□□□□□ -0.46
APTX-213ENST00000465003 DYNLT1P63172 113 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 CSTF1Q05048 431 aaKnown RBP12.17□□□□□ -0.46
APTX-213ENST00000465003 ANGPT1Q15389 498 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 B4GALNT4Q76KP1 1039 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 SETD3Q86TU7 594 aaPredicted RBP12.17□□□□□ -0.46
APTX-213ENST00000465003 TEKT4Q8WW24 435 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 TSC1Q92574 1164 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 MRGPRX3Q96LB0 322 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 TPSD1Q9BZJ3 242 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 CATSPERBQ9H7T0 1116 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 ERVW-1Q9UQF0 538 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 STARD13Q9Y3M8 1113 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
APTX-213ENST00000465003 A0A1W2PQF6 199 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 TCRBV21S2A2A0A5A6 115 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 C3orf70A6NLC5 250 aaPredicted RBP12.16□□□□□ -0.46
APTX-213ENST00000465003 H3BRJ5 948 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 LAMTOR5O43504 91 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 KRT7P08729 469 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 KRT10P13645 584 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 KDELR1P24390 212 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 NTSR1P30989 418 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 ARF5P84085 180 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 ECT2LQ008S8 904 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 CCDC173Q0VFZ6 552 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 POLD3Q15054 466 aaPredicted RBP12.16□□□□□ -0.46
APTX-213ENST00000465003 CRY1Q16526 586 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 PREPLQ4J6C6 727 aaPredicted RBP12.16□□□□□ -0.46
APTX-213ENST00000465003 KAZNQ674X7 775 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 C11orf63Q6NUN7 778 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 MFSD7Q6UXD7 560 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 NUDT18Q6ZVK8 323 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 RHOT1Q8IXI2 618 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 C17orf53Q8N3J3 647 aaPredicted RBP12.16□□□□□ -0.46
APTX-213ENST00000465003 SPEM1Q8N4L4 309 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 PRSS33Q8NF86 280 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 PCDH19Q8TAB3 1148 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 HMGB4Q8WW32 186 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 ARHGEF2Q92974 986 aaKnown RBP12.16□□□□□ -0.46
APTX-213ENST00000465003 SLC39A8Q9C0K1 460 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 THAP10Q9P2Z0 257 aaPredicted RBP12.16□□□□□ -0.46
APTX-213ENST00000465003 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 PLA2G4CQ9UP65 541 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 SHROOM3Q8TF72 1996 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 BTNL10A8MVZ5 291 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 RASA4BC9J798 803 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 DCLK1O15075 740 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 RASA4O43374 803 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 NRDCO43847 1150 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 MFSD11O43934 449 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 SLC1A1P43005 524 aa12.16□□□□□ -0.46
APTX-213ENST00000465003 CXCL12P48061 93 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms