RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 ARMCX3Q9UH62 379 aaPredicted RBP15.07■□□□□ 0
MCF2L-220ENST00000464800 F5H5T6 163 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 PRAMEF26H0Y7S4 382 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 TRIM38O00635 465 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 MT-CO3P00414 261 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 PDGFRAP16234 1089 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 NUMBP49757 651 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 KCNH2Q12809 1159 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 TAF1BQ53T94 588 aaPredicted RBP15.06■□□□□ 0
MCF2L-220ENST00000464800 TTC39BQ5VTQ0 682 aaPredicted RBP15.06■□□□□ 0
MCF2L-220ENST00000464800 AGBL4Q5VU57 503 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 BROXQ5VW32 411 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 FAM46CQ5VWP2 391 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 PCSK4Q6UW60 755 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 CCDC34Q96HJ3 373 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 BTN2A3PQ96KV6 586 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 ST7Q9NRC1 585 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
MCF2L-220ENST00000464800 TDRD6O60522 2096 aaKnown RBP15.05■□□□□ 0
MCF2L-220ENST00000464800 C1QTNF3-AMACRE9PGA6 284 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 PRCPP42785 496 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 FMO5P49326 533 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 UCNP55089 124 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 TMPRSS3P57727 454 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 FKBP3Q00688 224 aaKnown RBP15.05■□□□□ -0
MCF2L-220ENST00000464800 CNTN1Q12860 1018 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 ZC3H12AQ5D1E8 599 aaKnown RBP15.05■□□□□ -0
MCF2L-220ENST00000464800 SYPL2Q5VXT5 272 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 CIR1Q86X95 450 aaPredicted RBP15.05■□□□□ -0
MCF2L-220ENST00000464800 CCAR2Q8N163 923 aaKnown RBP15.05■□□□□ -0
MCF2L-220ENST00000464800 PPM1KQ8N3J5 372 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 OR4C6Q8NH72 309 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 FRS2Q8WU20 508 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 KLHDC7BQ96G42 594 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 NAF1Q96HR8 494 aaKnown RBP15.05■□□□□ -0
MCF2L-220ENST00000464800 ZNF578Q96N58 590 aaPredicted RBP15.05■□□□□ -0
MCF2L-220ENST00000464800 GOLPH3LQ9H4A5 285 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 RMND1Q9NWS8 449 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 SLC25A13Q9UJS0 675 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 SARDHQ9UL12 918 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 CA5BQ9Y2D0 317 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 PCDHB1Q9Y5F3 818 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 TENM4Q6N022 2769 aa15.05■□□□□ -0
MCF2L-220ENST00000464800 A0A1B0GVM2 712 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 TCAF2A6NFQ2 919 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 J3QKU1 62 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 RNF225M0QZC1 329 aaPredicted RBP15.04■□□□□ -0
MCF2L-220ENST00000464800 ALOX15BO15296 676 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 FFAR2O15552 330 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 ZNF202O95125 648 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 CALCAP01258 141 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 DGKAP23743 735 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 ACADSBP45954 432 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 OXCT1P55809 520 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 RHDQ02161 417 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 POM121L1PQ3SYA9 428 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 ACCSLQ4AC99 568 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 BEND5Q7L4P6 421 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 SLC25A45Q8N413 288 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 ATP6V0D2Q8N8Y2 350 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 ERCC4Q92889 916 aaPredicted RBP15.04■□□□□ -0
MCF2L-220ENST00000464800 KAT5Q92993 513 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 DEPDC7Q96QD5 511 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 PREBQ9HCU5 417 aa15.04■□□□□ -0
MCF2L-220ENST00000464800 A0A1W2PQ27 194 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 A0A1W2PQ64 194 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 ATP9BO43861 1147 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 RNGTTO60942 597 aaKnown RBP15.03■□□□□ -0
MCF2L-220ENST00000464800 TRUB2O95900 331 aaKnown RBP15.03■□□□□ -0
MCF2L-220ENST00000464800 MPOP05164 745 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 THEGLP0DJG4 465 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 ZNF18P17022 549 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 RPL34P49207 117 aaKnown RBP15.03■□□□□ -0
MCF2L-220ENST00000464800 VASPP50552 380 aaPredicted RBP15.03■□□□□ -0
MCF2L-220ENST00000464800 PLK1P53350 603 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 GABREP78334 506 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 LRRC63Q05C16 580 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 RABGAP1LQ5R372 815 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 ANKRD40Q6AI12 368 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 Q6ZVU0 165 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 TMC6Q7Z403 805 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 LSMEM2Q8N112 164 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 TMEM145Q8NBT3 493 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 HIC2Q96JB3 615 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 PPP1R9BQ96SB3 815 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 MYOCQ99972 504 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 POPDC2Q9HBU9 364 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 UCKL1Q9NWZ5 548 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 SLC12A6Q9UHW9 1150 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 PPM1HQ9ULR3 514 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 COL6A6A6NMZ7 2263 aa15.03■□□□□ -0
MCF2L-220ENST00000464800 MGAQ8IWI9 3026 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 TRIM49BA6NDI0 452 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 KCNU1A8MYU2 1149 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 MCF2LO15068 1137 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 OPA1O60313 960 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 DXOO77932 396 aaKnown RBP15.02■□□□□ -0
MCF2L-220ENST00000464800 IGLV3-25P01717 112 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 ALPPL2P10696 532 aa15.02■□□□□ -0
MCF2L-220ENST00000464800 CKMT1AP12532 417 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms