RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 COPAP53621 1224 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 SULT2A1Q06520 285 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 CAMK2GQ13555 558 aaPredicted RBP17.49■□□□□ 0.39
VPS52-215ENST00000464425 BYSLQ13895 437 aaKnown RBP17.49■□□□□ 0.39
VPS52-215ENST00000464425 EFHC2Q5JST6 749 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 ABCA7Q8IZY2 2146 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 ARFGAP1Q8N6T3 406 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 FNIP1Q8TF40 1166 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 ZC3H10Q96K80 434 aaKnown RBP17.49■□□□□ 0.39
VPS52-215ENST00000464425 PPP1R9BQ96SB3 815 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 PACSIN1Q9BY11 444 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 CD93Q9NPY3 652 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 PPARGC1AQ9UBK2 798 aaKnown RBP17.49■□□□□ 0.39
VPS52-215ENST00000464425 PCSK1NQ9UHG2 260 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 MBD1Q9UIS9 605 aaPredicted RBP17.49■□□□□ 0.39
VPS52-215ENST00000464425 FZD10Q9ULW2 581 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 CYP8B1Q9UNU6 501 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 PCDHA13Q9Y5I0 950 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 OR51B4Q9Y5P0 310 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 WDR87Q6ZQQ6 2873 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 A0A0D9SEW6 157 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 ARHGAP6O43182 974 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 RHOBTB1O94844 696 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 RETP07949 1114 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 KRT83P78385 493 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 NRG1Q02297 640 aaPredicted RBP17.48■□□□□ 0.39
VPS52-215ENST00000464425 CCDC173Q0VFZ6 552 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 SCAPQ12770 1279 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 TCEAL1Q15170 157 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 ELF2Q15723 593 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 C6orf118Q5T5N4 469 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 MANEALQ5VSG8 457 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 SETD3Q86TU7 594 aaPredicted RBP17.48■□□□□ 0.39
VPS52-215ENST00000464425 DEFB119Q8N690 84 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 OR2T3Q8NH03 318 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 PRCCQ92733 491 aaPredicted RBP17.48■□□□□ 0.39
VPS52-215ENST00000464425 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 SIPA1Q96FS4 1042 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 SPON2Q9BUD6 331 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 GPATCH2LQ9NWQ4 482 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 UVRAGQ9P2Y5 699 aa17.48■□□□□ 0.39
VPS52-215ENST00000464425 FRYLO94915 3013 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 CREB3O43889 395 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 SNAP91O60641 907 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 SIN3BO75182 1162 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 ZNF217O75362 1048 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 RNF8O76064 485 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 L1CAMP32004 1257 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 NNMTP40261 264 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 SPEM2Q0P670 501 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 HNRNPA1L2Q32P51 320 aaKnown RBP17.47■□□□□ 0.39
VPS52-215ENST00000464425 DAB2IPQ5VWQ8 1189 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 C11orf74Q86VG3 221 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 RHOT2Q8IXI1 618 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 TMEFF1Q8IYR6 380 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 KDM1BQ8NB78 822 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 OR7D4Q8NG98 312 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 TBC1D31Q96DN5 1066 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 BTBD6Q96KE9 485 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 PSMB7Q99436 277 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 ARRDC1-AS1Q9H2J1 176 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 ZNF212Q9UDV6 495 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 LCMT1Q9UIC8 334 aa17.47■□□□□ 0.39
VPS52-215ENST00000464425 SPAG17Q6Q759 2223 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 IGHV1OR15-9A0A0B4J2B8 117 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 ACADMP11310 421 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 RHOQP17081 205 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 MIPP30301 263 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 CCZ1BP86790 482 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 CCZ1P86791 482 aaPredicted RBP17.46■□□□□ 0.39
VPS52-215ENST00000464425 ACAP1Q15027 740 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 CCDC6Q16204 474 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 ACCSLQ4AC99 568 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 C9orf64Q5T6V5 341 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 ARMCX6Q7L4S7 300 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 NLRP14Q86W24 1093 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 KIAA2013Q8IYS2 634 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 TXLNBQ8N3L3 684 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 PEBP4Q96S96 227 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 NDFIP2Q9NV92 336 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 DNAI1Q9UI46 699 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 SLC25A13Q9UJS0 675 aa17.46■□□□□ 0.39
VPS52-215ENST00000464425 REXO2Q9Y3B8 237 aaKnown RBP17.46■□□□□ 0.39
VPS52-215ENST00000464425 GVINP1Q7Z2Y8 2422 aa17.46■□□□□ 0.38
VPS52-215ENST00000464425 EDDM13A0A1B0GTR0 161 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 ILVBLA1L0T0 632 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 PRPSAP2O60256 369 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 MTA2O94776 668 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 MT-CO1P00395 513 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 PTMAP06454 111 aaKnown RBP17.45■□□□□ 0.38
VPS52-215ENST00000464425 VAV1P15498 845 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 GLDCP23378 1020 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 EPHB2P29323 1055 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 DHPSP49366 369 aaPredicted RBP17.45■□□□□ 0.38
VPS52-215ENST00000464425 TPMTP51580 245 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 AIF1P55008 147 aa17.45■□□□□ 0.38
VPS52-215ENST00000464425 RPS14P62263 151 aaKnown RBP17.45■□□□□ 0.38
VPS52-215ENST00000464425 RPL6Q02878 288 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms