RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 PIK3R6Q5UE93 754 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 C1orf53Q5VUE5 145 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 CNKSR3Q6P9H4 555 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 PRSS55Q6UWB4 352 aaPredicted RBP22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 C14orf80Q86SX3 495 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 TTC17Q96AE7 1141 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 TRIM56Q9BRZ2 755 aaKnown RBP22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 SLC39A8Q9C0K1 460 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 CRISPLD2Q9H0B8 497 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 CASS4Q9NQ75 786 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 SYBUQ9NX95 663 aa22.22■■□□□ 1.15
PDLIM2-216ENST00000464275 KRT38O76015 456 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 UBOX5O94941 541 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 UPP2O95045 317 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 FOXN2P32314 431 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 SERPINB9P50453 376 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 DUSP4Q13115 394 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 SEPT7Q16181 437 aaKnown RBP22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 USP41Q3LFD5 358 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 WLSQ5T9L3 541 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 AFMIDQ63HM1 303 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 FBXO22Q8NEZ5 403 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 OR52K1Q8NGK4 314 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 MTBPQ96DY7 904 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 OXNAD1Q96HP4 312 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 MLPHQ9BV36 600 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 CDY1Q9Y6F8 540 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 CEP350Q5VT06 3117 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 TRIM49D1C9J1S8 452 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 CSH1P0DML2 217 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 CSH2P0DML3 217 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 RASIP1Q5U651 963 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 TIGD7Q6NT04 549 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 LVRNQ6Q4G3 990 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 LRRC49Q8IUZ0 686 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 SERAC1Q96JX3 654 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 CEP295NLQ96MC4 621 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 KLF6Q99612 283 aaPredicted RBP22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 CWH43Q9H720 699 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 MTRRQ9UBK8 725 aa22.21■■□□□ 1.15
PDLIM2-216ENST00000464275 COL4A6Q14031 1691 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 GOLGA8RI6L899 631 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 CACNG3O60359 315 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 CCNB1P14635 433 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 NCALDP61601 193 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 CRADDP78560 199 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 NAB1Q13506 487 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 PDK4Q16654 411 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 FAM133BQ5BKY9 247 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 ARHGAP36Q6ZRI8 547 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 SH2D5Q6ZV89 423 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 MARK2Q7KZI7 788 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 KLHDC8BQ8IXV7 354 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 TCP10LQ8TDR4 215 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 CDKL2Q92772 493 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 APOPT1Q96IL0 206 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 IL12RB2Q99665 862 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 PITPNM3Q9BZ71 974 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 LRRC40Q9H9A6 602 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 PIH1D1Q9NWS0 290 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 BFARQ9NZS9 450 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 MARCH2Q9P0N8 246 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 PPARGC1AQ9UBK2 798 aaKnown RBP22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 BACE2Q9Y5Z0 518 aa22.2■■□□□ 1.14
PDLIM2-216ENST00000464275 SLC38A8A6NNN8 435 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 AP3B1O00203 1094 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 MATN3O15232 486 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 MAFKO60675 156 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 LPXNO60711 386 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ATP5HO75947 161 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ZDHHC11BP0C7U3 371 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 CRYMQ14894 314 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 MS4A13Q5J8X5 152 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 SPANXN3Q5MJ09 141 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 C10orf120Q5SQS8 335 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ACBD5Q5T8D3 534 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 SLC8B1Q6J4K2 584 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ZNF683Q8IZ20 524 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 BTN2A3PQ96KV6 586 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 DONSONQ9NYP3 566 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 MPP6Q9NZW5 540 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 TBX21Q9UL17 535 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ATP6V1G2O95670 118 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 POLBP06746 335 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 EZRP15311 586 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 NQO1P15559 274 aaKnown RBP22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 CNTFP26441 200 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 NPY2RP49146 381 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 PSMD5Q16401 504 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ZNF449Q6P9G9 518 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 RNF168Q8IYW5 571 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 CNTD1Q8N815 330 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 USP33Q8TEY7 942 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 TTLL2Q9BWV7 592 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 ECT2Q9H8V3 914 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 PRDM5Q9NQX1 630 aaPredicted RBP22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 NDFIP2Q9NV92 336 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 VANGL2Q9ULK5 521 aa22.19■■□□□ 1.14
PDLIM2-216ENST00000464275 UGT1A9O60656 530 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms