RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 TLR6Q9Y2C9 796 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 TTLL3Q9Y4R7 772 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 FAM72CH0Y354 149 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 LPXNO60711 386 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 SPAG6O75602 509 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 C1QAP02745 245 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 C8AP07357 584 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 APRTP07741 180 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 VAV1P15498 845 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 CLCN4P51793 760 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 PPP2R5DQ14738 602 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 FAM72AQ5TYM5 149 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 FAM72DQ6L9T8 149 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 C4orf22Q6V702 233 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 CCDC149Q6ZUS6 474 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 ZNF534Q76KX8 674 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 FAM72BQ86X60 149 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 MIB1Q86YT6 1006 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 TNS4Q8IZW8 715 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 KREMEN2Q8NCW0 462 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 SLC44A1Q8WWI5 657 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 PLAC1Q9HBJ0 212 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 ARHGEF4Q9NR80 690 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 MARCH2Q9P0N8 246 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 PRKAG3Q9UGI9 489 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 GREB1Q4ZG55 1949 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-205ENST00000464187 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-205ENST00000464187 H0YHG0 523 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 MFSD11O43934 449 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 SUN1O94901 812 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 LRG1P02750 347 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 MAGEA3P43357 314 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 TBX4P57082 545 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 SEMA3BQ13214 749 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 KBTBD12Q3ZCT8 623 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 RGS9BPQ6ZS82 235 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 ITIH5Q86UX2 942 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 MCUQ8NE86 351 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 SLC39A13Q96H72 371 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 CDK5RAP1Q96SZ6 601 aaKnown RBP14.88□□□□□ -0.03
COL5A1-205ENST00000464187 CERS4Q9HA82 394 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 TMEM51Q9NW97 253 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 TRPM5Q9NZQ8 1165 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 UXTQ9UBK9 157 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-205ENST00000464187 OR12D3Q9UGF7 316 aa14.88□□□□□ -0.03
COL5A1-205ENST00000464187 SHROOM3Q8TF72 1996 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 H3BNC9 293 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 H3BRJ5 948 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 EEF2KO00418 725 aaKnown RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ZWINTO95229 277 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 TPSB2P20231 275 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 GPM6BQ13491 265 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 TPSAB1Q15661 275 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 PDK4Q16654 411 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 HECTD3Q5T447 861 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 HEATR6Q6AI08 1181 aaKnown RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 RFX8Q6ZV50 586 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 FAM47EQ6ZV65 393 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 PRPF39Q86UA1 669 aaKnown RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 SPOCK2Q92563 424 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 HAPLN3Q96S86 360 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 SLC12A4Q9UP95 1085 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ARL2BPQ9Y2Y0 163 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ASB3Q9Y575 518 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 SNX10Q9Y5X0 201 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 SLC12A8A0AV02 714 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 HACD1B0YJ81 288 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 PAGE1O75459 146 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 MOCS2O96007 188 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 GSTA1P08263 222 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 SLC2A3P11169 496 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ATP5C1P36542 298 aaKnown RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 PPP3CCP48454 512 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 DNAJC3Q13217 504 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 TRIP4Q15650 581 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 LVRNQ6Q4G3 990 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ZNF276Q8N554 614 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 BANPQ8N9N5 519 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 TFB1MQ8WVM0 346 aaKnown RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 FCRL2Q96LA5 508 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 EPAS1Q99814 870 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 NACA2Q9H009 215 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 SIK2Q9H0K1 926 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 OSBPL2Q9H1P3 480 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ZNF334Q9HCZ1 680 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 ZC3H7BQ9UGR2 993 aaKnown RBP14.87□□□□□ -0.03
COL5A1-205ENST00000464187 DNMT3LQ9UJW3 386 aa14.87□□□□□ -0.03
COL5A1-205ENST00000464187 IQANK1A0A1B0GTG1 560 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 GOLGA8RI6L899 631 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 DNAJC8O75937 253 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-205ENST00000464187 LRIG2O94898 1065 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 INHBAP08476 426 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 GBP2P32456 591 aaPredicted RBP14.86□□□□□ -0.03
COL5A1-205ENST00000464187 TUBP50607 506 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 TPI1P60174 286 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 SEMA5AQ13591 1074 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 DPYSQ14117 519 aa14.86□□□□□ -0.03
COL5A1-205ENST00000464187 HHATQ5VTY9 493 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms