RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ARL4CP56559 192 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RIPPLY3P57055 190 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NLRP11P59045 1033 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SP3Q02447 781 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF33BQ06732 778 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CSTF3Q12996 717 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ITPK1Q13572 414 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM25Q14258 630 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PUM1Q14671 1186 aaKnown RBP eCLIP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SPCS2Q15005 226 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SNX17Q15036 470 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 UBE3CQ15386 1083 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TOMM20Q15388 145 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MAPRE1Q15691 268 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 DGKDQ16760 1214 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 DNAL1Q4LDG9 190 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MAP1SQ66K74 1059 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 UNC5AQ6ZN44 842 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TMPRSS9Q7Z410 1059 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SLC22A16Q86VW1 577 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FAM109AQ8N4B1 249 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 AADATQ8N5Z0 425 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 LRRC20Q8TCA0 184 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF398Q8TD17 642 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TRUB1Q8WWH5 349 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RAPGEF4Q8WZA2 1011 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PIK3R3Q92569 461 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MARC2Q969Z3 335 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TMA16Q96EY4 203 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RMND5BQ96G75 393 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 HES6Q96HZ4 224 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZNF594Q96JF6 807 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 C9orf72Q96LT7 481 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RILPQ96NA2 401 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RBM14Q96PK6 669 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZIC5Q96T25 663 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PPP1R16BQ96T49 567 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PSD2Q9BQI7 771 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TMEM109Q9BVC6 243 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CDADC1Q9BWV3 514 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MROQ9BYG7 248 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FRMD8Q9BZ67 464 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RAD21L1Q9H4I0 556 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 KANSL2Q9H9L4 492 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 COPS7BQ9H9Q2 264 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CXorf21Q9HAI6 301 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 C11orf16Q9NQ32 467 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RPRD1BQ9NQG5 326 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGEF4Q9NR80 690 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 VPS45Q9NRW7 570 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PLSCR3Q9NRY6 295 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 EMC3Q9P0I2 261 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MARCOQ9UEW3 520 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PARP2Q9UGN5 583 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ASIC3Q9UHC3 531 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PFDN2Q9UHV9 154 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SMG5Q9UPR3 1016 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 JAG2Q9Y219 1238 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MAU2Q9Y6X3 613 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ZMYM2Q9UBW7 1377 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ADGRA3Q8IWK6 1321 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ARHGEF37A1IGU5 675 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SERTM1A2A2V5 107 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PI4KAP2A4QPH2 592 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 H0YC42 278 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TRIM77I1YAP6 450 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 EYA2O00167 538 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CDH16O75309 829 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 DAB1O75553 588 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 JRKO75564 520 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 RHOBTB3O94955 611 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PIGNO95427 931 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 BCL10O95999 233 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NPPAP01160 153 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MMP1P03956 469 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SERPING1P05155 500 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ALOX5P09917 674 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 HSMCR30P0CW71 290 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 POU2F1P14859 743 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NPR3P17342 541 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ADRA1DP25100 572 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PRDX6P30041 224 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FMO4P31512 558 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 OPRL1P41146 370 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NPTX2P47972 431 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 TPD52P55327 224 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 FKBP1AP62942 108 aaKnown RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 GSTO1P78417 241 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SLC13A2Q13183 592 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SP140Q13342 867 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 PEX6Q13608 980 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 LAMC2Q13753 1193 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NFE2L1Q14494 772 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 POU6F1Q14863 301 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 NEDD8Q15843 81 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 SLC18A3Q16572 532 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 ASTE1Q2TB18 679 aaPredicted RBP3.68□□□□□ -1.82
COL8A1-205ENST00000463753 MTERF2Q49AM1 385 aa3.68□□□□□ -1.82
COL8A1-205ENST00000463753 CEP55Q53EZ4 464 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms