RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 MAGEA4P43358 317 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 NRIP1P48552 1158 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 LMAN1P49257 510 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 CDH4P55283 916 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 RPS24P62847 133 aaKnown RBP19.45■□□□□ 0.7
CCDC78-206ENST00000463539 IFI35P80217 286 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-206ENST00000463539 POLD3Q15054 466 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-206ENST00000463539 TPSAB1Q15661 275 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-206ENST00000463539 ITPRIPL1Q6GPH6 555 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 LRIG3Q6UXM1 1119 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 Q6ZNB5 142 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 AGAP3Q96P47 875 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 FRMD8Q9BZ67 464 aaPredicted RBP19.45■□□□□ 0.7
CCDC78-206ENST00000463539 CFAP97Q9P2B7 532 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 SH3BP1Q9Y3L3 701 aa19.45■□□□□ 0.7
CCDC78-206ENST00000463539 CCDC195A0A1B0GUA6 201 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 NUDT17P0C025 328 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 CCNB1P14635 433 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 AVPR1AP37288 418 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 YBEYP58557 167 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 PDIA2Q13087 525 aaKnown RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 SLC29A2Q14542 456 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 TEAD2Q15562 447 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 DUSP6Q16828 381 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 SLC5A9Q2M3M2 681 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ZNF354CQ86Y25 554 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ZBED8Q8IZ13 594 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 TNS4Q8IZW8 715 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 GOLGA6L1Q8N7Z2 621 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 TEKT5Q96M29 485 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 MED4Q9NPJ6 270 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 NINJ2Q9NZG7 142 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 OGFRQ9NZT2 677 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 RSPH14Q9UHP6 348 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ARHGAP26Q9UNA1 814 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 EPOPA6NHQ4 379 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 EIF3HO15372 352 aaKnown RBP eCLIP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ZBTB24O43167 697 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 TSPAN3O60637 253 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 MOSPD3O75425 235 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ACSL3O95573 720 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 TTC4O95801 387 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 SGSHP51688 502 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 IFFO1Q0D2I5 559 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 KYNUQ16719 465 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ANO4Q32M45 955 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 FNBP1LQ5T0N5 605 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 UBAP2Q5T6F2 1119 aaKnown RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 CHST9Q7L1S5 443 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 GRASPQ7Z6J2 395 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 KRT222Q8N1A0 295 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 MCUQ8NE86 351 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 OR2W6PQ8NHA6 318 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ZSCAN18Q8TBC5 510 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ZNF707Q96C28 371 aaPredicted RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 C9orf72Q96LT7 481 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 SERPINB12Q96P63 405 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 GBA3Q9H227 469 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 TASP1Q9H6P5 420 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 EIF2B3Q9NR50 452 aaKnown RBP19.44■□□□□ 0.7
CCDC78-206ENST00000463539 ZNF510Q9Y2H8 683 aa19.44■□□□□ 0.7
CCDC78-206ENST00000463539 MYO7AQ13402 2215 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 ANAPC1Q9H1A4 1944 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 A0A1B0GVM2 712 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 TCAF2A6NFQ2 919 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 OPA1O60313 960 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 NTHL1P78549 312 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 CDK16Q00536 496 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 C6orf118Q5T5N4 469 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 HTR3DQ70Z44 454 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 CMTM8Q8IZV2 173 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 USP33Q8TEY7 942 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 TTC25Q96NG3 672 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 SMG9Q9H0W8 520 aaKnown RBP19.43■□□□□ 0.7
CCDC78-206ENST00000463539 SP110Q9HB58 689 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 NFS1Q9Y697 457 aa19.43■□□□□ 0.7
CCDC78-206ENST00000463539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 TYW5A2RUC4 315 aaKnown RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 E7ESA3 106 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 LEFTY2O00292 366 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 ALOX15BO15296 676 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 CD68P34810 354 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 EIF3BP55884 814 aaKnown RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 SARNPP82979 210 aaKnown RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 ZNF177Q13360 481 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 MTM1Q13496 603 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 FASTKD3Q14CZ7 662 aaKnown RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 BBS9Q3SYG4 887 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 MSS51Q4VC12 460 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 PRSS36Q5K4E3 855 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 HP1BP3Q5SSJ5 553 aaPredicted RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 CEP85LQ5SZL2 805 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 TDHQ8IZJ6 230 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 PDCD7Q8N8D1 485 aaKnown RBP19.42■□□□□ 0.7
CCDC78-206ENST00000463539 FATE1Q969F0 183 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 IL12RB2Q99665 862 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 PIDD1Q9HB75 910 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 OBSL1O75147 1896 aa19.42■□□□□ 0.7
CCDC78-206ENST00000463539 SOBPA7XYQ1 873 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms