RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 GANQ9H2C0 597 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 KDM4CQ9H3R0 1056 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 RETREG1Q9H6L5 497 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 GAREM1Q9H706 876 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 TM9SF3Q9HD45 589 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 LIMA1Q9UHB6 759 aaKnown RBP7.49□□□□□ -1.21
PTPRF-210ENST00000463041 SLC25A13Q9UJS0 675 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 WASF3Q9UPY6 502 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 ANKRD6Q9Y2G4 727 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 FARP1Q9Y4F1 1045 aaPredicted RBP7.49□□□□□ -1.21
PTPRF-210ENST00000463041 FRYQ5TBA9 3013 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 TMEM131Q92545 1883 aa7.49□□□□□ -1.21
PTPRF-210ENST00000463041 CHD5Q8TDI0 1954 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 KMT2BQ9UMN6 2715 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 IGLV3-10A0A075B6K4 115 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 A0A1B0GVT2 93 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 A0A1W2PP55 124 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 A0A1W2PPC4 97 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ILVBLA1L0T0 632 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 FAM221BA6H8Z2 402 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 FAM47DPA6NHR8 397 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 C10orf142B7Z368 130 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 GOLGA8SH3BPF8 625 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 MCF2LO15068 1137 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 VILLO15195 856 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ALOX15BO15296 676 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 SLC7A4O43246 635 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 RNASEH2AO75792 299 aaKnown RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 CNTN5O94779 1100 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 MBD3O95983 291 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 IL1BP01584 269 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 IGHV4-34P06331 123 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 RHOCP08134 193 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 CHRNB2P17787 502 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 TFE3P19532 575 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 MMP8P22894 467 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 NUDT1P36639 197 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 FLT3P36888 993 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 GRIA4P48058 902 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 STK19P49842 368 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 COPB1P53618 953 aaKnown RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 JAM2P57087 298 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 RACK1P63244 317 aaKnown RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 FMO1Q01740 532 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 BNC1Q01954 994 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 MYL5Q02045 173 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 UBXN1Q04323 297 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 SLC20A2Q08357 652 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 CCDC15Q0P6D6 951 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 FOXC1Q12948 553 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 DLG2Q15700 870 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 STX1AQ16623 288 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF423Q2M1K9 1284 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 CCDC183Q5T5S1 534 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 OTUD1Q5VV17 481 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 NAA35Q5VZE5 725 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 NCEH1Q6PIU2 408 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ZNF783Q6ZMS7 281 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 BNIPLQ7Z465 357 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 GLRX5Q86SX6 157 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 CIR1Q86X95 450 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 SH2D3CQ8N5H7 860 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 NEK11Q8NG66 645 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 OR2I1PQ8NGU4 316 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 OR8D1Q8WZ84 308 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 SNX19Q92543 992 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 PCMTD1Q96MG8 357 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ERGIC2Q96RQ1 377 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 TBCBQ99426 244 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ORAI3Q9BRQ5 295 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 C2orf49Q9BVC5 232 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ADAM33Q9BZ11 813 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 MUC3BQ9H195 1237 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 NLRC4Q9NPP4 1024 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 ANLNQ9NQW6 1124 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 TM7SF3Q9NS93 570 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 FAM207AQ9NSI2 230 aaPredicted RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 PPARGC1AQ9UBK2 798 aaKnown RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 NOCTQ9UK39 431 aaKnown RBP7.48□□□□□ -1.21
PTPRF-210ENST00000463041 VPS28Q9UK41 221 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 PPM1HQ9ULR3 514 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 HS3ST2Q9Y278 367 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 SIK3Q9Y2K2 1263 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 DMXL2Q8TDJ6 3036 aa7.48□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3DA0A087WVF3 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3IA0A087WXS9 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3EA0A087X179 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3KA0A087X1G2 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CXorf51AA0A1B0GTR3 108 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SPAARA0A1B0GVQ0 90 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3FA6NER0 549 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 LGALS16A8MUM7 142 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 TBC1D3LB9A6J9 549 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 E9PAM4 449 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 C1QTNF3-AMACRE9PGA6 284 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 I6L893 689 aaPredicted RBP7.47□□□□□ -1.21
PTPRF-210ENST00000463041 SRGAP2O75044 1071 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CBFA2T3O75081 653 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 PROS1P07225 676 aa7.47□□□□□ -1.21
PTPRF-210ENST00000463041 CCDC172P0C7W6 258 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms