RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 NOX1Q9Y5S8 564 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 GON4LQ3T8J9 2241 aa5.43□□□□□ -1.54
COPS3-204ENST00000462236 ASCC3Q8N3C0 2202 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 PRAMEF33A0A0G2JMD5 474 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 TMEM200CA6NKL6 621 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 B4DLN1 442 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 RASA4BC9J798 803 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 RNF113AO15541 343 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 RASA4O43374 803 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 ORC4O43929 436 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 PRAMEF10O60809 474 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 CHRNA1P02708 482 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 PDHBP11177 359 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 LAG3P18627 525 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 PTGS2P35354 604 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 NRIP1P48552 1158 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 MRPL12P52815 198 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 RPS7P62081 194 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 CXADRP78310 365 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 HSD11B2P80365 405 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 SP2Q02086 613 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 ZNF543Q08ER8 600 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 PUM1Q14671 1186 aaKnown RBP eCLIP5.42□□□□□ -1.54
COPS3-204ENST00000462236 IQCB1Q15051 598 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 STXBP2Q15833 593 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 DUSP6Q16828 381 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 LONRF3Q496Y0 759 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 CELF3Q5SZQ8 465 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 B3GNTL1Q67FW5 361 aaPredicted RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 SEPT14Q6ZU15 432 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 TOGARAM2Q6ZUX3 1019 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 DGLUCYQ7Z3D6 616 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 GAS2L3Q86XJ1 694 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 PALM2Q8IXS6 379 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 COLGALT2Q8IYK4 626 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 UBALD2Q8IYN6 164 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 ZNF276Q8N554 614 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 CACTINQ8WUQ7 758 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 POF1BQ8WVV4 589 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 MAML1Q92585 1016 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 ATP6V0A1Q93050 837 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 PPP2R3CQ969Q6 453 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 RPGRIP1Q96KN7 1286 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 NELL2Q99435 816 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 MPHOSPH6Q99547 160 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 CDCA3Q99618 268 aaPredicted RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 APOL5Q9BWW9 433 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 SACM1LQ9NTJ5 587 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 DKK2Q9UBU2 259 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 SHOC2Q9UQ13 582 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 MTO1Q9Y2Z2 717 aaKnown RBP5.42□□□□□ -1.54
COPS3-204ENST00000462236 TRIP11Q15643 1979 aa5.42□□□□□ -1.54
COPS3-204ENST00000462236 ATG2BQ96BY7 2078 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 TDRD15B5MCY1 1934 aaKnown RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 FSD2A1L4K1 749 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 C17orf102A2RUQ5 167 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 EIF3JO75822 258 aaKnown RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 SUN1O94901 812 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 INMTO95050 263 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 KIF20AO95235 890 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 LGALS2P05162 132 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 ZFYP08048 801 aaPredicted RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 ELANEP08246 267 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 SMIM10L2AP0DMW4 78 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 SMIM10L2BP0DMW5 78 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 TGFB3P10600 412 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 TOP1P11387 765 aaKnown RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 TDO2P48775 406 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 PRIM2P49643 509 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 HSD17B4P51659 736 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 UCP3P55916 312 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 LOXL3P58215 753 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 UBE3AQ05086 875 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 BIRC2Q13490 618 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 DYRK1AQ13627 763 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 LPIN1Q14693 890 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 CYP2A13Q16696 494 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 LONRF1Q17RB8 773 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 NRN1LQ496H8 165 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 SFRP4Q6FHJ7 346 aaPredicted RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 ANKRD54Q6NXT1 300 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 CHST3Q7LGC8 479 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 ITPRIPQ8IWB1 547 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 CCDC105Q8IYK2 499 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 FAM186BQ8IYM0 893 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 PSD4Q8NDX1 1056 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 ACRBPQ8NEB7 543 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 FAM46DQ8NEK8 389 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 ZNF483Q8TF39 744 aaPredicted RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 CCDC138Q96M89 665 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 OSBPL9Q96SU4 736 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 TMEM47Q9BQJ4 181 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 ZSWIM1Q9BR11 485 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 MESP1Q9BRJ9 268 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 SELENOOQ9BVL4 669 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 EIF2AQ9BY44 585 aaKnown RBP5.41□□□□□ -1.54
COPS3-204ENST00000462236 SMOC2Q9H3U7 446 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 PXMP2Q9NR77 195 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 ZSCAN32Q9NX65 697 aa5.41□□□□□ -1.54
COPS3-204ENST00000462236 STX8Q9UNK0 236 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms