RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 SMTNL1A8MU46 457 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 F8VZ95 297 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 MMEP08473 750 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 ZNF883P0CG24 379 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 MZF1P28698 734 aaPredicted RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 SOX5P35711 763 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 NUDT1P36639 197 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 CTSOP43234 321 aaPredicted RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 ARRB1P49407 418 aaPredicted RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 NUMBP49757 651 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 CCT8P50990 548 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 DNA2P51530 1060 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 PLK1P53350 603 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 RACK1P63244 317 aaKnown RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 TPM4P67936 248 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 ATP11AP98196 1134 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 MYL5Q02045 173 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 STAT4Q14765 748 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 ARID5BQ14865 1188 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 DLG2Q15700 870 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 CDO1Q16878 200 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 CCDC183Q5T5S1 534 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 C9orf64Q5T6V5 341 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 RWDD4Q6NW29 188 aaKnown RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 NCEH1Q6PIU2 408 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 UNQ6494/PRO21346Q6UXR6 183 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 SETD3Q86TU7 594 aaPredicted RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 SERAC1Q96JX3 654 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 C1orf74Q96LT6 269 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 FEM1AQ9BSK4 669 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 SCNM1Q9BWG6 230 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 ADAM33Q9BZ11 813 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 NEUROG2Q9H2A3 272 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 MTG2Q9H4K7 406 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 TM9SF3Q9HD45 589 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 OSGEPQ9NPF4 335 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 GDF3Q9NR23 364 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 FANCLQ9NW38 375 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 INTS6Q9UL03 887 aaKnown RBP9.11□□□□□ -0.95
LDB1-203ENST00000461873 CACNA1AO00555 2505 aa9.11□□□□□ -0.95
LDB1-203ENST00000461873 ITIH6Q6UXX5 1313 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 A0A1W2PPC4 97 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 FAM170AA1A519 330 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 TMEM8BA6NDV4 472 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 E9PAM4 449 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CBX4O00257 560 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 KPNA3O00505 521 aaPredicted RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 ALOX15BO15296 676 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 YKT6O15498 198 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 SLC7A4O43246 635 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PRNPP04156 253 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CALB1P05937 261 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 ITGAVP06756 1048 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CD38P28907 300 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CDH5P33151 784 aaPredicted RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 GRK6P43250 576 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 GABRB2P47870 512 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CXCR3P49682 368 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 STK19P49842 368 aaPredicted RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 CLCN6P51797 869 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 GALCP54803 685 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 GEMIN4P57678 1058 aaKnown RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 PITX1P78337 314 aaPredicted RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 CDR2Q01850 454 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CENPCQ03188 943 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 KCNMA1Q12791 1236 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 KRT31Q15323 416 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 KIF19Q2TAC6 998 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CCDC157Q569K6 752 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PPP1R2P3Q6NXS1 205 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CAVIN1Q6NZI2 390 aaKnown RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 TFAP2DQ7Z6R9 452 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 XYLT1Q86Y38 959 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 RYBPQ8N488 228 aaPredicted RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 OXR1Q8N573 874 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PTPRN2Q92932 1015 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 IGSF8Q969P0 613 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PGAP3Q96FM1 320 aaPredicted RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 MRGPRX3Q96LB0 322 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 CFAP57Q96MR6 1250 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 HAPLN3Q96S86 360 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 TBCBQ99426 244 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 NPY6RQ99463 290 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PRMT1Q99873 361 aaKnown RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 C11orf70Q9BRQ4 267 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 ZYG11BQ9C0D3 744 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 ATP13A1Q9HD20 1204 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 METTL5Q9NRN9 209 aaKnown RBP9.1□□□□□ -0.95
LDB1-203ENST00000461873 PIGVQ9NUD9 493 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 ARHGEF38Q9NXL2 777 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 DONSONQ9NYP3 566 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 ADAM22Q9P0K1 906 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PCDHGB2Q9Y5G2 931 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 SNX11Q9Y5W9 270 aa9.1□□□□□ -0.95
LDB1-203ENST00000461873 PCNX2A6NKB5 2137 aa9.09□□□□□ -0.95
LDB1-203ENST00000461873 VILLO15195 856 aa9.09□□□□□ -0.95
LDB1-203ENST00000461873 HYAL3O43820 417 aaPredicted RBP9.09□□□□□ -0.95
LDB1-203ENST00000461873 PCDH8O95206 1070 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms