RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ABCD1P33897 745 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 BSGP35613 385 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 MVDP53602 400 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 IFI35P80217 286 aaPredicted RBP3.19□□□□□ -1.9
HPS3-203ENST00000460822 TXNL4AP83876 142 aaKnown RBP3.19□□□□□ -1.9
HPS3-203ENST00000460822 NEXNQ0ZGT2 675 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 TP53BP2Q13625 1128 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 ZNF618Q5T7W0 954 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 Q6YL49 198 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 C17orf53Q8N3J3 647 aaPredicted RBP3.19□□□□□ -1.9
HPS3-203ENST00000460822 PLD5Q8N7P1 536 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 CCDC191Q8NCU4 936 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 TNIP2Q8NFZ5 429 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 SCFD2Q8WU76 684 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 PTCD3Q96EY7 689 aaKnown RBP3.19□□□□□ -1.9
HPS3-203ENST00000460822 CALML4Q96GE6 196 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 COQ10AQ96MF6 247 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.19□□□□□ -1.9
HPS3-203ENST00000460822 HDHD5Q9BXW7 423 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 TXLNGYQ9BZA5 131 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 TRIM31Q9BZY9 425 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 EPHX3Q9H6B9 360 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 MTMR4Q9NYA4 1195 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 MGAT4CQ9UBM8 478 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 DKK3Q9UBP4 350 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 KLQ9UEF7 1012 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 CCNL1Q9UK58 526 aaPredicted RBP3.19□□□□□ -1.9
HPS3-203ENST00000460822 OSGIN2Q9Y236 505 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 LYVE1Q9Y5Y7 322 aa3.19□□□□□ -1.9
HPS3-203ENST00000460822 CYP3A7-CYP3A51PA0A087WV96 503 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 VWC2LB2RUY7 222 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 TEX22C9J3V5 150 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PER2O15055 1255 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PRAMEF2O60811 474 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 DKC1O60832 514 aaKnown RBP eCLIP3.18□□□□□ -1.9
HPS3-203ENST00000460822 ERAL1O75616 437 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 KAT7O95251 611 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PGM3O95394 542 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ARSAP15289 507 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CYP3A7P24462 503 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CTGFP29279 349 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 AVPR2P30518 371 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 HNF1BP35680 557 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PDE1AP54750 535 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ARHGAP8P85298 464 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 B4GALNT1Q00973 533 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CALD1Q05682 793 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 CCDC15Q0P6D6 951 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 LRMPQ12912 555 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ALKBH1Q13686 389 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 AP5B1Q2VPB7 878 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 DUSP28Q4G0W2 176 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 GXYLT1Q4G148 440 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 SLC9B1Q4ZJI4 515 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 TEDDM1Q5T9Z0 273 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PCSK4Q6UW60 755 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PTCHD4Q6ZW05 846 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CREBRFQ8IUR6 639 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 TAGAPQ8N103 731 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 VPS52Q8N1B4 723 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 WDTC1Q8N5D0 677 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 SIRT6Q8N6T7 355 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 FRMD1Q8N878 549 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PNPLA1Q8N8W4 532 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CNOT9Q92600 299 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 SAAL1Q96ER3 474 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 NPAS1Q99742 590 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ADAM2Q99965 735 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 HTATIP2Q9BUP3 242 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CINPQ9BW66 212 aaPredicted RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 SLC32A1Q9H598 525 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 USP29Q9HBJ7 922 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 ZCCHC17Q9NP64 241 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 MRGBPQ9NV56 204 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 HDAC6Q9UBN7 1215 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CFDP1Q9UEE9 299 aaPredicted RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 LIMA1Q9UHB6 759 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 KCNE2Q9Y6J6 123 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 GOLGA6L10A0A0M3HER8 536 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 BEST1O76090 585 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 SPDEFO95238 335 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 MBPP02686 304 aaPredicted RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 CYP4B1P13584 511 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 IGFBP2P18065 325 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 MATN1P21941 496 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PRPH2P23942 346 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 PPARGP37231 505 aaPredicted RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 PBX3P40426 434 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 DPP6P42658 865 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CPA2P48052 419 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 CTCFP49711 727 aaPredicted RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 DIO1P49895 249 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 RPL7AP62424 266 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 EFNB1P98172 346 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 HNRNPA0Q13151 305 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 BYSLQ13895 437 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 PSMD6Q15008 389 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 RASA2Q15283 850 aa3.18□□□□□ -1.9
HPS3-203ENST00000460822 SF3B3Q15393 1217 aaKnown RBP3.18□□□□□ -1.9
HPS3-203ENST00000460822 ZNF667Q5HYK9 610 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms