RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 HIST2H2ACQ16777 129 aaPredicted RBP15.02■□□□□ -0
PTPRU-205ENST00000460170 HIST2H2AA3Q6FI13 130 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 DHFR2Q86XF0 187 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 HERC6Q8IVU3 1022 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 DIS3LQ8TF46 1054 aaKnown RBP15.02■□□□□ -0
PTPRU-205ENST00000460170 TLCD1Q96CP7 247 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 SLC17A7Q9P2U7 560 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 STXBP5LQ9Y2K9 1186 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 DUOX1Q9NRD9 1551 aa15.02■□□□□ -0
PTPRU-205ENST00000460170 FASP25445 335 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ADSSP30520 456 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ICAM3P32942 547 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ENPEPQ07075 957 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 RETSATQ6NUM9 610 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 PRMT9Q6P2P2 845 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ANKS3Q6ZW76 656 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 TTC30AQ86WT1 665 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ZNF229Q9UJW7 825 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 FAM58BPP0C7Q3 252 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 PATL1Q86TB9 770 aaKnown RBP15.02□□□□□ -0.01
PTPRU-205ENST00000460170 MAF1Q9H063 256 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 WRAP73Q9P2S5 460 aaPredicted RBP15.02□□□□□ -0.01
PTPRU-205ENST00000460170 MAN1A2O60476 641 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 CCNB1P14635 433 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 SLC25A3Q00325 362 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 CENPLQ8N0S6 344 aaPredicted RBP15.02□□□□□ -0.01
PTPRU-205ENST00000460170 LGI2Q8N0V4 545 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 MTMR14Q8NCE2 650 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 CPT1BQ92523 772 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ASB2Q96Q27 587 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 POLR1EQ9GZS1 481 aaKnown RBP15.02□□□□□ -0.01
PTPRU-205ENST00000460170 ACTR8Q9H981 624 aa15.02□□□□□ -0.01
PTPRU-205ENST00000460170 GEMIN8Q9NWZ8 242 aaKnown RBP15.02□□□□□ -0.01
PTPRU-205ENST00000460170 COL1A1P02452 1464 aaPredicted RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 DAB1O75553 588 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 URODP06132 367 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 ARHGAP15Q53QZ3 475 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 SLC44A1Q8WWI5 657 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 PYDC1Q8WXC3 89 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 ACOX2Q99424 681 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 KCTD14Q9BQ13 255 aaPredicted RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 RNPEPQ9H4A4 650 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 AAASQ9NRG9 546 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 GRHL1Q9NZI5 618 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 CRYL1Q9Y2S2 319 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 DERAQ9Y315 318 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 PMM2O15305 246 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 CLK1P49759 484 aaKnown RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 CYP51A1Q16850 503 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 PRAMEF19Q5SWL8 479 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 STRADAQ7RTN6 431 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 TMEM79Q9BSE2 394 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 B3GNT5Q9BYG0 378 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 GABRB2P47870 512 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 CCNG1P51959 295 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 SAMD4BQ5PRF9 694 aaKnown RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 MOB2Q70IA6 237 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 NET1Q7Z628 596 aaPredicted RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 C1orf127Q8N9H9 656 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 P2RY11Q96G91 374 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 DUSP16Q9BY84 665 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 MARCH2Q9P0N8 246 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 RPL26L1Q9UNX3 145 aaKnown RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 SLC15A5A6NIM6 579 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 SAC3D1A6NKF1 404 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 WASHC5Q12768 1159 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 EMILIN2Q9BXX0 1053 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 ACE2Q9BYF1 805 aaPredicted RBP15.01□□□□□ -0.01
PTPRU-205ENST00000460170 NMRK1Q9NWW6 199 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 SEPT3Q9UH03 358 aa15.01□□□□□ -0.01
PTPRU-205ENST00000460170 SOAT1P35610 550 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 PTDSS1P48651 473 aaKnown RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 EPHB3P54753 998 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 NUP107P57740 925 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 CXCL17Q6UXB2 119 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 PACS1Q6VY07 963 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 LRRC8DQ7L1W4 858 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 GLT6D1Q7Z4J2 308 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 MICU2Q8IYU8 434 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 MIER2Q8N344 545 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 PPTC7Q8NI37 304 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 ELOVL6Q9H5J4 265 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 CNGB3Q9NQW8 809 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 FBXO6Q9NRD1 293 aaPredicted RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 PTCH2Q9Y6C5 1203 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 PRIM2P49643 509 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 PKNOX1P55347 436 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 SLC25A52Q3SY17 297 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 APOBEC3GQ9HC16 384 aaKnown RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 PAPOLBQ9NRJ5 636 aaKnown RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 LTA4HP09960 611 aaKnown RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 ZNF7P17097 686 aaPredicted RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 FRG1Q14331 258 aaKnown RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 LACTB2Q53H82 288 aaPredicted RBP15□□□□□ -0.01
PTPRU-205ENST00000460170 C9orf57Q5W0N0 161 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 GPR142Q7Z601 462 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 SLC41A1Q8IVJ1 513 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 PLD5Q8N7P1 536 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 OR56A4Q8NGH8 313 aa15□□□□□ -0.01
PTPRU-205ENST00000460170 MECRQ9BV79 373 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms