RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 K7ENM7 598 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 TP73O15350 636 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SEPT4O43236 478 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SGPL1O95470 568 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 PYGLP06737 847 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 POLBP06746 335 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 TGFB3P10600 412 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CNTFP26441 200 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CERS1P27544 350 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 PNPLA4P41247 253 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CLK1P49759 484 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 ADPRHP54922 357 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CFHR1Q03591 330 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SRSF4Q08170 494 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 NEXNQ0ZGT2 675 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 WASHC5Q12768 1159 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SLC12A1Q13621 1099 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 GPR162Q16538 588 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SUPT20HL1Q3ZLR7 823 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CTXN3Q4LDR2 81 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 ARL13AQ5H913 290 aaPredicted RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 EARS2Q5JPH6 523 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 SLC18B1Q6NT16 456 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 RTL10Q7L3V2 364 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 YTHDF3Q7Z739 585 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 LCA5Q86VQ0 697 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 TMEM200AQ86VY9 491 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CPOQ8IVL8 374 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 ENDOVQ8N8Q3 282 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 ARL14EPQ8N8R7 260 aaPredicted RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 OR52N4Q8NGI2 321 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 IGFBPL1Q8WX77 278 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 HERVK_113Q902F9 699 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 KAT2BQ92831 832 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 CCDC34Q96HJ3 373 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 ADAD1Q96M93 576 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 TWNKQ96RR1 684 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SERINC2Q96SA4 455 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 FAM118BQ9BPY3 351 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 EIF2AK1Q9BQI3 630 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 SCNM1Q9BWG6 230 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SEZ6LQ9BYH1 1024 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 TXNRD2Q9NNW7 524 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 TLR8Q9NR97 1041 aaKnown RBP3.68□□□□□ -1.82
VPS8-215ENST00000460158 RASSF1Q9NS23 344 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SLC22A11Q9NSA0 550 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 SMC4Q9NTJ3 1288 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 GGA3Q9NZ52 723 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 PGAP2Q9UHJ9 254 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 FBXO4Q9UKT5 387 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 ODF2LQ9ULJ1 636 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 TTLL3Q9Y4R7 772 aa3.68□□□□□ -1.82
VPS8-215ENST00000460158 C2CD4BA6NLJ0 364 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 MCIDASD6RGH6 385 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 NCAM2O15394 837 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 BCAR3O75815 825 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 CELA2AP08217 269 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 CNPP09543 421 aaKnown RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 CPA1P15085 419 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 ATP5F1P24539 256 aaPredicted RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 OAS2P29728 719 aaKnown RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 AVPR2P30518 371 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 ZBED6P86452 979 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 HSF1Q00613 529 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 STIM1Q13586 685 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 ALKBH1Q13686 389 aaKnown RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 DAZAP2Q15038 168 aaPredicted RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 LIPMQ5VYY2 423 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 MTFR2Q6P444 385 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 SLC2A7Q6PXP3 512 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 C16orf54Q6UWD8 224 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 RNF144BQ7Z419 303 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 LRRTM4Q86VH4 590 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 GLCCI1Q86VQ1 547 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 SNX32Q86XE0 403 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 CNGA4Q8IV77 575 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 VPS52Q8N1B4 723 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 PAQR4Q8N4S7 273 aaPredicted RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 NAXEQ8NCW5 288 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 FAM110DQ8TAY7 271 aaPredicted RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 ZFPM2Q8WW38 1151 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 IP6K1Q92551 441 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 ATP6V1E2Q96A05 226 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 AP1M1Q9BXS5 423 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 TRIM31Q9BZY9 425 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 SEMA4CQ9C0C4 833 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 CHMP4BQ9H444 224 aaKnown RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 NOD2Q9HC29 1040 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 MOV10Q9HCE1 1003 aaKnown RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 ERVK-5Q9HDB9 667 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 SH3GLB2Q9NR46 395 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 THAP1Q9NVV9 213 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 KLQ9UEF7 1012 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 PKP3Q9Y446 797 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 LRRFIP2Q9Y608 721 aaKnown RBP3.67□□□□□ -1.82
VPS8-215ENST00000460158 ITIH6Q6UXX5 1313 aa3.67□□□□□ -1.82
VPS8-215ENST00000460158 CYP2D7A0A087X1C5 515 aa3.66□□□□□ -1.82
VPS8-215ENST00000460158 VWA3AA6NCI4 1184 aa3.66□□□□□ -1.82
VPS8-215ENST00000460158 RRN3P2A6NIE6 340 aa3.66□□□□□ -1.82
VPS8-215ENST00000460158 KCNU1A8MYU2 1149 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms