RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 SCAND1P57086 179 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 EIF4A1P60842 406 aaKnown RBP0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 TLE4Q04727 773 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 SLC20A2Q08357 652 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ZBTB17Q13105 803 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 NFATC2Q13469 925 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 GALNT3Q14435 633 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 HIGD2BQ4VC39 106 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 PDSS1Q5T2R2 415 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 NSUN5P2Q63ZY6 315 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 SEL1L3Q68CR1 1132 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 HEPHL1Q6MZM0 1159 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 CNNM4Q6P4Q7 775 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 PAQR6Q6TCH4 344 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 TBC1D1Q86TI0 1168 aaPredicted RBP0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 MB21D2Q8IYB1 491 aaPredicted RBP0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 GPD1LQ8N335 351 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 PGBD5Q8N414 524 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ZNF441Q8N8Z8 693 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 SLC24A4Q8NFF2 622 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 DNAJB14Q8TBM8 379 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 HERVK_113Q902F9 699 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 FIG4Q92562 907 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 GJA10Q969M2 543 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ALG14Q96F25 216 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ZNF333Q96JL9 665 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ZNF583Q96ND8 569 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ZNF285Q96NJ3 590 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 GPATCH1Q9BRR8 931 aaKnown RBP0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 SCRT1Q9BWW7 348 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 ZCWPW1Q9H0M4 648 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 CNNM1Q9NRU3 951 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 SMARCAL1Q9NZC9 954 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 LRFN1Q9P244 771 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 CACNG5Q9UF02 275 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 KLK13Q9UKR3 277 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 FAF1Q9UNN5 650 aaPredicted RBP0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 TNFSF13BQ9Y275 285 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 PAM16Q9Y3D7 125 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 C2CD2Q9Y426 696 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 PTCH2Q9Y6C5 1203 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 TENM1Q9UKZ4 2725 aa0.16□□□□□ -2.38
SNORD42B-201ENST00000458893 FAM220BPB1ANY3 271 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 RSPH10B2B2RC85 870 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 NT5C1B-RDH14C9J2C7 533 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 NPIPB11E5RHQ5 1161 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 MSI1O43347 362 aaKnown RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PI15O43692 258 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 SNX2O60749 519 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 SRGAP2O75044 1071 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 STK10O94804 968 aaKnown RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 SOX30O94993 753 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 RASAL1O95294 804 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 CH25HO95992 272 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 HOXC4P09017 264 aaPredicted RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 RSPH10BP0C881 870 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ZNF853P0CG23 659 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PRSS56P0CW18 603 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TMEM225BP0DP42 221 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PDIA4P13667 645 aaKnown RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ENO3P13929 434 aaPredicted RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 GNB3P16520 340 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 CD53P19397 219 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 KLK2P20151 261 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 GNLYP22749 145 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC8A1P32418 973 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TNFSF8P32971 234 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 RPL3P39023 403 aaKnown RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 MXI1P50539 228 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 FUT6P51993 359 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TMPRSS3P57727 454 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PITX1P78337 314 aaPredicted RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ZFP36L1Q07352 338 aaKnown RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 COX10Q12887 443 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 IL10RAQ13651 578 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TNFAIP1Q13829 316 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 NFE2L2Q16236 605 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PTCHD3Q3KNS1 767 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PLA1AQ53H76 456 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 CCNYL2Q5T2Q4 361 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TBC1D9BQ66K14 1250 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 OLFML2AQ68BL7 652 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TIFABQ6ZNK6 161 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ADGRD2Q7Z7M1 963 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ZNF547Q8IVP9 402 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PPM1KQ8N3J5 372 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 C11orf44Q8N8P7 122 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 C3orf20Q8ND61 904 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 PPHLN1Q8NEY8 458 aaKnown RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 RFWD2Q8NHY2 731 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 LNX1Q8TBB1 728 aaPredicted RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 LMBR1Q8WVP7 490 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TMEM190Q8WZ59 177 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TM9SF4Q92544 642 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 NPIPB3Q92617 1050 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 WDYHV1Q96HA8 205 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ZNF845Q96IR2 970 aaPredicted RBP0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 ZNF354BQ96LW1 612 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 TTC14Q96N46 770 aa0.15□□□□□ -2.39
SNORD42B-201ENST00000458893 SLC2A13Q96QE2 648 aa0.15□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms