RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 LGMNQ99538 433 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 LBHD1Q9BQE6 289 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 EBF4Q9BQW3 602 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRPL45Q9BRJ2 306 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MRPL1Q9BYD6 325 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ACE2Q9BYF1 805 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NUF2Q9BZD4 464 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PRKD2Q9BZL6 878 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 UBE2OQ9C0C9 1292 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 UPF3AQ9H1J1 476 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 GBA3Q9H227 469 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TASP1Q9H6P5 420 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 MINDY3Q9H8M7 445 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 COG4Q9H9E3 785 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 UGT1A7Q9HAW7 530 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 UGT1A10Q9HAW8 530 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 UGT1A8Q9HAW9 530 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 IARS2Q9NSE4 1012 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 C20orf96Q9NUD7 363 aaPredicted RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SETD4Q9NVD3 440 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PNPOQ9NVS9 261 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 OXSMQ9NWU1 459 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTTG2Q9NZH5 202 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 COX16Q9P0S2 106 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 ATXN10Q9UBB4 475 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 STK39Q9UEW8 545 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 GTF2IRD1Q9UHL9 959 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 IPO11Q9UI26 975 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 VPS28Q9UK41 221 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 EMCNQ9ULC0 261 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SLC39A10Q9ULF5 831 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 TMCO1Q9UM00 188 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PADI4Q9UM07 663 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 SCAF8Q9UPN6 1271 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 DMTF1Q9Y222 760 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 POMPQ9Y244 141 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 INPP5FQ9Y2H2 1132 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 AAR2Q9Y312 384 aaKnown RBP3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 NUMBLQ9Y6R0 609 aa3.4□□□□□ -1.87
HMGN1P18-201ENST00000457642 PLXNA1Q9UIW2 1896 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 A0A0G2JLL6 359 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 LOC100653049A0A140TA62 436 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARHGEF37A1IGU5 675 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HEATR9A2RTY3 570 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HMX2A2RU54 273 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 BBIP1A8MTZ0 92 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 BTBD19C9JJ37 291 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 F5H423 210 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 H0YJX3 145 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 M0QYT0 321 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FZD9O00144 591 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MATN2O00339 956 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NEMP1O14524 444 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 TNPO2O14787 897 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 IRF6O14896 467 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CFLARO15519 480 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 DENRO43583 198 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ITM2AO43736 263 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RNASEH1O60930 286 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NOL3O60936 208 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GPC4O75487 556 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 AP1G2O75843 785 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 BCAS2O75934 225 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 KRT34O76011 436 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 VAPBO95292 243 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ARIH2O95376 493 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PIGNO95427 931 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 EGFRP00533 1210 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PENKP01210 267 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 VTNP04004 478 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PGK2P07205 417 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GJB1P08034 283 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PDGFRBP09619 1106 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FAM200BP0CF97 657 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HSPA1AP0DMV8 641 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HSPA1BP0DMV9 641 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ERVK-10P10266 1014 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ENO3P13929 434 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 STMN1P16949 149 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NPR3P17342 541 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HOXB8P17481 243 aaPredicted RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PSMC3P17980 439 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 WARSP23381 471 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PTPN3P26045 913 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PMLP29590 882 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CYP2C18P33260 490 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 HTR7P34969 479 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 MLH1P40692 756 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GRIA4P48058 902 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RPL34P49207 117 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 GEMP55040 296 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 NR1H2P55055 460 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 RAB10P61026 200 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ESRRGP62508 458 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 CRADDP78560 199 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ZNF33AQ06730 810 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 PPIDQ08752 370 aaKnown RBP3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 ADIGQ0VDE8 80 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 SCAPQ12770 1279 aa3.39□□□□□ -1.87
HMGN1P18-201ENST00000457642 FSTL1Q12841 308 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms