RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 NKD2Q969F2 451 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 TBC1D31Q96DN5 1066 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 PDLIM2Q96JY6 352 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 KCTD15Q96SI1 283 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 LUC7LQ9NQ29 371 aaKnown RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 PRMT8Q9NR22 394 aaPredicted RBP10.33□□□□□ -0.76
ATG4A-206ENST00000457035 TMEM248Q9NWD8 314 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 MMP17Q9ULZ9 603 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 SHROOM3Q8TF72 1996 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 MYO15AQ9UKN7 3530 aa10.33□□□□□ -0.76
ATG4A-206ENST00000457035 RIF1Q5UIP0 2472 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 KNL1Q8NG31 2342 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 A0A0D9SEW6 157 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 A0A0U1RQJ8 604 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ILVBLA1L0T0 632 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 WASH4PA8MWX3 477 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 K7ESF4 209 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 NPC1O15118 1278 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ARHGAP6O43182 974 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 LAMTOR5O43504 91 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 IPO7O95373 1038 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 KLF8O95600 359 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ATP5BP06576 529 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 DLDP09622 509 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 TDGF1P13385 188 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 POLR2EP19388 210 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 IL4RP24394 825 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 EPHB2P29323 1055 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 NTSR1P30989 418 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 HOXA6P31267 233 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 HTR7P34969 479 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 IL12RB1P42701 662 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 NOP2P46087 812 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 HCAR3P49019 387 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CCR3P51677 355 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ARSEP51690 589 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CCZ1BP86790 482 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CCZ1P86791 482 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF234Q14588 700 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ANGPT1Q15389 498 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CRY1Q16526 586 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 DPYSL2Q16555 572 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 HADHQ16836 314 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 SMTNL2Q2TAL5 461 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 PITRM1Q5JRX3 1037 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 RNF219Q5W0B1 726 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 RWDD4Q6NW29 188 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 POLNQ7Z5Q5 900 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 TFAP2DQ7Z6R9 452 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CCDC112Q8NEF3 446 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 FAM71BQ8TC56 605 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CYB5D2Q8WUJ1 264 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ATRIPQ8WXE1 791 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ACDQ96AP0 544 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 MYO19Q96H55 970 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 MRGPRX3Q96LB0 322 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 PPP1R9BQ96SB3 815 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 GABRG3Q99928 467 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 DESI2Q9BSY9 194 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CIPCQ9C0C6 399 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ZWILCHQ9H900 591 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 CWC15Q9P013 229 aaKnown RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 FBXO4Q9UKT5 387 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 PLA2G4CQ9UP65 541 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ADGRG1Q9Y653 693 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ALG6Q9Y672 507 aa10.32□□□□□ -0.76
ATG4A-206ENST00000457035 ZFHX2Q9C0A1 2572 aaPredicted RBP10.32□□□□□ -0.76
ATG4A-206ENST00000457035 MUC22E2RYF6 1773 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 PI4KAP42356 2102 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 CEP192Q8TEP8 1941 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 A0A1W2PQF6 199 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TMEM110-MUSTN1A8MSY1 372 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 EEF2KO00418 725 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 BUB1BO60566 1050 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 MOCS3O95396 460 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 ASLP04424 464 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 RHOCP08134 193 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 GOT1P17174 413 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 WASP42768 502 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 SLC1A1P43005 524 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 CTSOP43234 321 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 MAPKAPK2P49137 400 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF135P52742 658 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TPI1P60174 286 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 ECT2LQ008S8 904 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 CSTF1Q05048 431 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 E2F5Q15329 346 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 PPP6R3Q5H9R7 873 aaPredicted RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 EOGTQ5NDL2 527 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TSSK4Q6SA08 328 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 ZNF783Q6ZMS7 281 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TRMT11Q7Z4G4 463 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 CHPFQ8IZ52 775 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 RTL3Q8N8U3 475 aaKnown RBP10.31□□□□□ -0.76
ATG4A-206ENST00000457035 OR7D4Q8NG98 312 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 TSC1Q92574 1164 aa10.31□□□□□ -0.76
ATG4A-206ENST00000457035 HSPH1Q92598 858 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms