RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 NFKB1P19838 968 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 TYK2P29597 1187 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 PTDSS1P48651 473 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SLC1A6P48664 564 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SMAD1Q15797 465 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 ITPRIPL1Q6GPH6 555 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 ANO7Q6IWH7 933 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 CXCL17Q6UXB2 119 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 CD300LGQ6UXG3 332 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 TAC4Q86UU9 113 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SERINC5Q86VE9 423 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.78■□□□□ 0.64e-10■□□□□ 10
SEMA3B-209ENST00000456560 PKMYT1Q99640 499 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 ACBD6Q9BR61 282 aa18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 AGO3Q9H9G7 860 aaKnown RBP18.78■□□□□ 0.6
SEMA3B-209ENST00000456560 SERPINA6P08185 405 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 SERPINB6P35237 376 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 NPY2RP49146 381 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 LIMK2P53671 638 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 TUBB3Q13509 450 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 KHDC1Q4VXA5 237 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 DCLRE1AQ6PJP8 1040 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 DCLK2Q8N568 766 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 CFAP61Q8NHU2 1237 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 PIWIL2Q8TC59 973 aaKnown RBP18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 TEKT5Q96M29 485 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 EBF4Q9BQW3 602 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 DCLRE1BQ9H816 532 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 SNX15Q9NRS6 342 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 DNAJC16Q9Y2G8 782 aa18.77■□□□□ 0.6
SEMA3B-209ENST00000456560 MAGEB16A2A368 324 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 CYP11A1P05108 521 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 ODC1P11926 461 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 CALRP27797 417 aaKnown RBP18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 SPRP35270 261 aaPredicted RBP18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 TSNAXIP1Q2TAA8 658 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 CERCAMQ5T4B2 595 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 ATG14Q6ZNE5 492 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 STRA8Q7Z7C7 330 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 C10orf107Q8IVU9 208 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 KLHDC8BQ8IXV7 354 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 DNAAF3Q8N9W5 541 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 OR6Y1Q8NGX8 325 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 ZNF483Q8TF39 744 aaPredicted RBP18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 OSBPL2Q9H1P3 480 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 TMLHEQ9NVH6 421 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.77■□□□□ 0.598e-6■■■□□ 14.7
SEMA3B-209ENST00000456560 TAGLN3Q9UI15 199 aa18.77■□□□□ 0.59
SEMA3B-209ENST00000456560 B2RBV5 119 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 GPR182O15218 404 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 ZNF623O75123 536 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 ENO1P06733 434 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 PDHA1P08559 390 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 GRK2P25098 689 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 CRHR2Q13324 411 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 EIF4EBP2Q13542 120 aaPredicted RBP18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 TBCCQ15814 346 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 TMPRSS6Q8IU80 811 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 DQX1Q8TE96 717 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 MCUR1Q96AQ8 359 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 TSGA13Q96PP4 275 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 AGAP2Q99490 1192 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 SORT1Q99523 831 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 MCMBPQ9BTE3 642 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 COPG2Q9UBF2 871 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 ENO4A6NNW6 628 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 IGLV3-25P01717 112 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 BDNFP23560 247 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 GMPRP36959 345 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 SERPINB8P50452 374 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 CMPK2Q5EBM0 449 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 BEND5Q7L4P6 421 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 CMC1Q7Z7K0 106 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 WDR75Q8IWA0 830 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 DNAJC9Q8WXX5 260 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 STN1Q9H668 368 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 SPATS2LQ9NUQ6 558 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 SORCS3Q9UPU3 1222 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 NEU3Q9UQ49 428 aa18.76■□□□□ 0.59
SEMA3B-209ENST00000456560 NUP205Q92621 2012 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 DPPA5A6NC42 116 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 TNPO2O14787 897 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 MGEA5O60502 916 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 MAGEC1O60732 1142 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 JCHAINP01591 159 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 ARRB2P32121 409 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 BRCC3P46736 316 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 CPA2P48052 419 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 RAP1GDS1P52306 607 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 ZNF33AQ06730 810 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 CCDC153Q494R4 210 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 FSTL4Q6MZW2 842 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 FBXO27Q8NI29 283 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 AZIN2Q96A70 460 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 MFSD3Q96ES6 412 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 RILPQ96NA2 401 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 UPF3AQ9H1J1 476 aaKnown RBP18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 ZNF358Q9NW07 568 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 SOX13Q9UN79 622 aa18.75■□□□□ 0.59
SEMA3B-209ENST00000456560 ARHGAP42A6NI28 874 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms