RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TAS2R40P59535 323 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 GNA12Q03113 381 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 PPP6R3Q5H9R7 873 aaPredicted RBP28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 KIAA1211LQ6NV74 962 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 RASSF3Q86WH2 238 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 HSPH1Q92598 858 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 STAU2Q9NUL3 570 aaKnown RBP eCLIP28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 NUP205Q92621 2012 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 GOT1P17174 413 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 NOP2P46087 812 aaKnown RBP28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 PXNP49023 591 aaPredicted RBP28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 FNTBP49356 437 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 VAV2P52735 878 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 ST8SIA6P61647 398 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 KRT83P78385 493 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 RFX8Q6ZV50 586 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 LRRC8AQ8IWT6 810 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 OR7D4Q8NG98 312 aa28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 CWC15Q9P013 229 aaKnown RBP28.69■■■□□ 2.18
SMARCC1-203ENST00000454240 PJA2O43164 708 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 HLA-EP13747 358 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 HEATR6Q6AI08 1181 aaKnown RBP28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 POLNQ7Z5Q5 900 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 WDR5BQ86VZ2 330 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 LONP2Q86WA8 852 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 DCAF4L2Q8NA75 395 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 CCDC112Q8NEF3 446 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 FAM71BQ8TC56 605 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 ATOH1Q92858 354 aaPredicted RBP28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 RPL10LQ96L21 214 aaKnown RBP28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 C2orf49Q9BVC5 232 aaPredicted RBP28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 ACE2Q9BYF1 805 aaPredicted RBP28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 MAGEH1Q9H213 219 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 NOL6Q9H6R4 1146 aaKnown RBP28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 SLCO3A1Q9UIG8 710 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 SALL4Q9UJQ4 1053 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 PCDHGA2Q9Y5H1 932 aa28.68■■■□□ 2.18
SMARCC1-203ENST00000454240 TCRBV21S2A2A0A5A6 115 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 BTNL10A8MVZ5 291 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 ALDH1A2O94788 518 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 EPHX1P07099 455 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 SLC1A1P43005 524 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 STK19P49842 368 aaPredicted RBP28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 STARD3Q14849 445 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 ATP13A4Q4VNC1 1196 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 MDGA1Q8NFP4 955 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 ARHGEF2Q92974 986 aaKnown RBP28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 LACRTQ9GZZ8 138 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 PCDH18Q9HCL0 1135 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 DONSONQ9NYP3 566 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 SUN2Q9UH99 717 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 VPS51Q9UID3 782 aa28.67■■■□□ 2.18
SMARCC1-203ENST00000454240 SYNCRIPO60506 623 aaKnown RBP28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 SNAP91O60641 907 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 RAMP2O60895 175 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 LILRB5O75023 590 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 KRT7P08729 469 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 ERCC2P18074 760 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 ETFBP38117 255 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 ARSEP51690 589 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 CAMK2GQ13555 558 aaPredicted RBP28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 DPYSQ14117 519 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 ANO7Q6IWH7 933 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 UMODL1-AS1Q8N2C9 162 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 ZNF366Q8N895 744 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 TSC1Q92574 1164 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 DESI2Q9BSY9 194 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 SPON2Q9BUD6 331 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 SLC25A13Q9UJS0 675 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 DUSP10Q9Y6W6 482 aa28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 NYNRINQ9P2P1 1898 aaKnown RBP28.66■■■□□ 2.18
SMARCC1-203ENST00000454240 H3BRJ5 948 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 AXIN1O15169 862 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 DAPK3O43293 454 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 BUB1BO60566 1050 aaPredicted RBP28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 ZMPSTE24O75844 475 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 GABRG2P18507 467 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 ACVRL1P37023 503 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 NNMTP40261 264 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 ARL4AP40617 200 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 YBEYP58557 167 aaPredicted RBP28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 POLD3Q15054 466 aaPredicted RBP28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 HNRNPA1L2Q32P51 320 aaKnown RBP28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 HMGB4Q8WW32 186 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 ATRIPQ8WXE1 791 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 CALR3Q96L12 384 aaKnown RBP28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 ATP13A1Q9HD20 1204 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 HS3ST2Q9Y278 367 aa28.65■■■□□ 2.18
SMARCC1-203ENST00000454240 TTC34A8MYJ7 566 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 ARHGAP6O43182 974 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 GLDCP23378 1020 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 CDH6P55285 790 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 ZC3H14Q6PJT7 736 aaKnown RBP28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 KIAA1328Q86T90 577 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 ERLEC1Q96DZ1 483 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 CSPG4P5Q96PW8 444 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 KLC2Q9H0B6 622 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 PRSS16Q9NQE7 514 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 FAM86C1Q9NVL1 165 aa28.64■■■□□ 2.18
SMARCC1-203ENST00000454240 RCOR3Q9P2K3 495 aaPredicted RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms