RNA–Protein interactions for RNA: ENST00000454214.1

NDUFB3-204, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NDUFB3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-204ENST00000454214 CCDC47Q96A33 483 aaKnown RBP6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 PLD4Q96BZ4 506 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 KLHDC7BQ96G42 594 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 DEPDC7Q96QD5 511 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 HNRNPABQ99729 332 aaKnown RBP6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 DUSP16Q9BY84 665 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 ULBP1Q9BZM6 244 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 XYLT2Q9H1B5 865 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 TNMDQ9H2S6 317 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 FBRSQ9HAH7 460 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 CD248Q9HCU0 757 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 OLA1Q9NTK5 396 aaKnown RBP6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 FAM13BQ9NYF5 915 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 PCDHB1Q9Y5F3 818 aa6.9□□□□□ -1.3
NDUFB3-204ENST00000454214 MYH10P35580 1976 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 WDFY3Q8IZQ1 3526 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 GOLGA4Q13439 2230 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 SYNJ2BP-COX16A0A087WUM0 186 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CYSRT1A8MQ03 144 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 TTC34A8MYJ7 566 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 B8ZZF3 427 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 POLR2DO15514 142 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 SIGLEC6O43699 453 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CALUO43852 315 aaPredicted RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 GREM1O60565 184 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 MAGEC1O60732 1142 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CSO75390 466 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 VNN1O95497 513 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ZBED1O96006 694 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 RPN1P04843 607 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 IGHV4-34P06331 123 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 TRIM49P0CI25 452 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 TRIM49CP0CI26 452 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 C6P13671 934 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 HOXB4P17483 251 aaPredicted RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 EPHA8P29322 1005 aaPredicted RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 HLA-FP30511 346 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CSKP41240 450 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 KIF11P52732 1056 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ZNF542PQ5EBM4 170 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ARSJQ5FYB0 599 aaPredicted RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 TCERG1LQ5VWI1 586 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 KLHDC10Q6PID8 442 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CRTC1Q6UUV9 634 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 UNC13DQ70J99 1090 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CCDC186Q7Z3E2 898 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 GRAMD1CQ8IYS0 662 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 LSMEM2Q8N112 164 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CFAP52Q8N1V2 620 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 LSM14AQ8ND56 463 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 UBA3Q8TBC4 463 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 SAP25Q8TEE9 199 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 TAF4BQ92750 862 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 VCPIP1Q96JH7 1222 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 RPL10LQ96L21 214 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ZNF578Q96N58 590 aaPredicted RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ZNF396Q96N95 335 aaPredicted RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 TWNKQ96RR1 684 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 DDX50Q9BQ39 737 aaKnown RBP6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CSNK1G1Q9HCP0 422 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 DYRK4Q9NR20 520 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 THSD1Q9NS62 852 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 DNAJC28Q9NX36 388 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CLIC5Q9NZA1 410 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 IL37Q9NZH6 218 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 COX16Q9P0S2 106 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 SERGEFQ9UGK8 458 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 FBXO10Q9UK96 956 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 SCML1Q9UN30 329 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 CA5BQ9Y2D0 317 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 UBE4BO95155 1302 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ITIH6Q6UXX5 1313 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 PLXND1Q9Y4D7 1925 aa6.89□□□□□ -1.31
NDUFB3-204ENST00000454214 ACACAQ13085 2346 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 EDDM13A0A1B0GTR0 161 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 FRMD3A2A2Y4 597 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 SHISA8B8ZZ34 492 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 HHLA1C9JL84 531 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 WNT9AO14904 365 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 SLC31A1O15431 190 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 PCDH8O95206 1070 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 IGLV3-19P01714 112 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 C4BPAP04003 597 aaKnown RBP6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 NR3C1P04150 777 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 HSP90AA1P07900 732 aaKnown RBP6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 GOT1P17174 413 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 HOXD9P28356 352 aaPredicted RBP6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 HOXD13P35453 343 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 ASPAP45381 313 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 ME1P48163 572 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 PPM1FP49593 454 aaPredicted RBP6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 RGS7P49802 495 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 DUSP3P51452 185 aaPredicted RBP6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 SGSHP51688 502 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 VAMP7P51809 220 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 TBX4P57082 545 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 NXPH1P58417 271 aa6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 SNRPFP62306 86 aaKnown RBP6.88□□□□□ -1.31
NDUFB3-204ENST00000454214 NFKB2Q00653 900 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms