RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 NNMTP40261 264 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 PMS1P54277 932 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 PPP2CBP62714 309 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 PPP2CAP67775 309 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 E2F1Q01094 437 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 SULT2A1Q06520 285 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 ZNF211Q13398 564 aaPredicted RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 TAC4Q86UU9 113 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 TRIM69Q86WT6 500 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 LGI2Q8N0V4 545 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 STK32AQ8WU08 396 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 CCDC34Q96HJ3 373 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 BTN2A3PQ96KV6 586 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 NT5C1BQ96P26 610 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 FCRL3Q96P31 734 aaPredicted RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 GSDMAQ96QA5 445 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 PRMT1Q99873 361 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 TRIM62Q9BVG3 475 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 SLC4A5Q9BY07 1137 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 METTL14Q9HCE5 456 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.03□□□□□ -0.48
HERC3-207ENST00000452979 KIAA1468Q9P260 1216 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 XPO7Q9UIA9 1087 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 HOOK1Q9UJC3 728 aaKnown RBP12.03□□□□□ -0.48
HERC3-207ENST00000452979 PPM1HQ9ULR3 514 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 CNTN6Q9UQ52 1028 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 CEP83Q9Y592 693 aa12.03□□□□□ -0.48
HERC3-207ENST00000452979 KCNU1A8MYU2 1149 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 PRAMEF26H0Y7S4 382 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 P4HA2O15460 535 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 BRINP1O60477 761 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 RNGTTO60942 597 aaKnown RBP12.02□□□□□ -0.49
HERC3-207ENST00000452979 RTN2O75298 545 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 ZIC2O95409 532 aaPredicted RBP12.02□□□□□ -0.49
HERC3-207ENST00000452979 CALCAP01258 141 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 VAV1P15498 845 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 ACADSBP45954 432 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 STK19P49842 368 aaPredicted RBP12.02□□□□□ -0.49
HERC3-207ENST00000452979 METAP1P53582 386 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 GCNT1Q02742 428 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 STAT4Q14765 748 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 MEA1Q16626 185 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 SKOR2Q2VWA4 1001 aaPredicted RBP12.02□□□□□ -0.49
HERC3-207ENST00000452979 ZC3H12AQ5D1E8 599 aaKnown RBP12.02□□□□□ -0.49
HERC3-207ENST00000452979 TTC39BQ5VTQ0 682 aaPredicted RBP12.02□□□□□ -0.49
HERC3-207ENST00000452979 FAM46CQ5VWP2 391 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 RAP1GAP2Q684P5 730 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 GPR155Q7Z3F1 870 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 DSG4Q86SJ6 1040 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 TMEM110Q86TL2 294 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 PPM1KQ8N3J5 372 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 SLC25A45Q8N413 288 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 KAT5Q92993 513 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 SMARCE1Q969G3 411 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 ALG14Q96F25 216 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 TJP2Q9UDY2 1190 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 SARDHQ9UL12 918 aa12.02□□□□□ -0.49
HERC3-207ENST00000452979 TRIM49BA6NDI0 452 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 F5H5T6 163 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 BIN1O00499 593 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 TRIM38O00635 465 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 CAPN9O14815 690 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 MCF2LO15068 1137 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 ALOX15BO15296 676 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 SIGLEC6O43699 453 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 ATP9BO43861 1147 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 SMC2O95347 1197 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 TRUB2O95900 331 aaKnown RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 MOCS2O96007 188 aaPredicted RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 APOEP02649 317 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 OXCT1P55809 520 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 YWHAZP63104 245 aaKnown RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 TLE3Q04726 772 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 TBC1D25Q3MII6 688 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 SETMARQ53H47 684 aaPredicted RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 AGBL4Q5VU57 503 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 ISM2Q6H9L7 571 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 CXorf57Q6NSI4 855 aaKnown RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 PCSK4Q6UW60 755 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 ERICH1Q86X53 443 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 CCAR2Q8N163 923 aaKnown RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 EHBP1Q8NDI1 1231 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 FEM1AQ9BSK4 669 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
HERC3-207ENST00000452979 POPDC2Q9HBU9 364 aa12.01□□□□□ -0.49
HERC3-207ENST00000452979 A0A1B0GVM2 712 aa12□□□□□ -0.49
HERC3-207ENST00000452979 TCAF2A6NFQ2 919 aa12□□□□□ -0.49
HERC3-207ENST00000452979 MT-CO3P00414 261 aa12□□□□□ -0.49
HERC3-207ENST00000452979 PLA2G2AP14555 144 aa12□□□□□ -0.49
HERC3-207ENST00000452979 PDGFRAP16234 1089 aa12□□□□□ -0.49
HERC3-207ENST00000452979 MAT2AP31153 395 aaKnown RBP12□□□□□ -0.49
HERC3-207ENST00000452979 TAS2R38P59533 333 aa12□□□□□ -0.49
HERC3-207ENST00000452979 CETN1Q12798 172 aa12□□□□□ -0.49
HERC3-207ENST00000452979 CNTN1Q12860 1018 aa12□□□□□ -0.49
HERC3-207ENST00000452979 MORC3Q14149 939 aa12□□□□□ -0.49
HERC3-207ENST00000452979 ZSCAN23Q3MJ62 389 aa12□□□□□ -0.49
HERC3-207ENST00000452979 CDCP2Q5VXM1 449 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms