RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 MTBPQ96DY7 904 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 HAPLN3Q96S86 360 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 CRISPLD1Q9H336 500 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 CATSPERBQ9H7T0 1116 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 KLC4Q9NSK0 619 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 C20orf96Q9NUD7 363 aaPredicted RBP12.03□□□□□ -0.48
VTA1-203ENST00000452973 TRHDEQ9UKU6 1024 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
VTA1-203ENST00000452973 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 C2CD2LO14523 706 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 ALDH1A2O94788 518 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 ITGA2BP08514 1039 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TYK2P29597 1187 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 SLC11A1P49279 550 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 PGGT1BP53609 377 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TBX4P57082 545 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 ITKQ08881 620 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 NIPAL4Q0D2K0 466 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 DUSP4Q13115 394 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 PCSK7Q16549 785 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TCTN1Q2MV58 587 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 C10orf120Q5SQS8 335 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 STEAP4Q687X5 459 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 PRSS55Q6UWB4 352 aaPredicted RBP12.02□□□□□ -0.48
VTA1-203ENST00000452973 NLRP9Q7RTR0 991 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TAS1R1Q7RTX1 841 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 STRA8Q7Z7C7 330 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 MTDHQ86UE4 582 aaKnown RBP12.02□□□□□ -0.48
VTA1-203ENST00000452973 ARHGAP12Q8IWW6 846 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.02□□□□□ -0.48
VTA1-203ENST00000452973 C10orf82Q8WW14 230 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 SERPINB11Q96P15 392 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TMEM237Q96Q45 408 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TSEN34Q9BSV6 310 aaKnown RBP12.02□□□□□ -0.48
VTA1-203ENST00000452973 FTHL17Q9BXU8 183 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 TRIM55Q9BYV6 548 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 CAB39LQ9H9S4 337 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 RAD54BQ9Y620 910 aa12.02□□□□□ -0.48
VTA1-203ENST00000452973 DHRS4L1P0CG22 281 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 RPL17P18621 184 aaKnown RBP12.02□□□□□ -0.49
VTA1-203ENST00000452973 COG7P83436 770 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 TAF10Q12962 218 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 BNIP1Q12981 228 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 GPNMBQ14956 572 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 RTP2Q5QGT7 225 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 ZNF280DQ6N043 979 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 CYB5D1Q6P9G0 228 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 CIR1Q86X95 450 aaPredicted RBP12.02□□□□□ -0.49
VTA1-203ENST00000452973 GBP7Q8N8V2 638 aaPredicted RBP12.02□□□□□ -0.49
VTA1-203ENST00000452973 NAT9Q9BTE0 207 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 RBM22Q9NW64 420 aaKnown RBP eCLIP12.02□□□□□ -0.49
VTA1-203ENST00000452973 HAO1Q9UJM8 370 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 NEU3Q9UQ49 428 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 LAMA3Q16787 3333 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 MAFKO60675 156 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 KCNA4P22459 653 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 YWHAQP27348 245 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 NMBRP28336 390 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 PAPOLAP51003 745 aaKnown RBP12.02□□□□□ -0.49
VTA1-203ENST00000452973 ZBTB16Q05516 673 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 BST1Q10588 318 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 GALNTL6Q49A17 601 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 ANKRD20A4Q4UJ75 823 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 PIK3R6Q5UE93 754 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 RNF19BQ6ZMZ0 732 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 MARK2Q7KZI7 788 aaKnown RBP12.02□□□□□ -0.49
VTA1-203ENST00000452973 CCNJLQ8IV13 435 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 E2F7Q96AV8 911 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 PABPC5Q96DU9 382 aaKnown RBP12.02□□□□□ -0.49
VTA1-203ENST00000452973 DEFB118Q96PH6 123 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 BRD8Q9H0E9 1235 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 UNC93B1Q9H1C4 597 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 FBXO44Q9H4M3 255 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 ZNF358Q9NW07 568 aa12.02□□□□□ -0.49
VTA1-203ENST00000452973 FAM237BA0A1B0GVD1 139 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 TTC24A2A3L6 582 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 INPPL1O15357 1258 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 DNAJC8O75937 253 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 CNTN5O94779 1100 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 CBX6O95503 412 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 GSTA1P08263 222 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 PAX3P23760 479 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 MAXP61244 160 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 EIF4EBP2Q13542 120 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 PDE1CQ14123 709 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 TAF1BQ53T94 588 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 N4BP2L1Q5TBK1 243 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 KCTD11Q693B1 232 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 FUT10Q6P4F1 479 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 SCML4Q8N228 414 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 CASD1Q96PB1 797 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 FICDQ9BVA6 458 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 CASS4Q9NQ75 786 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 IARS2Q9NSE4 1012 aaKnown RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 SCML2Q9UQR0 700 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 KCNU1A8MYU2 1149 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 RASSF9O75901 435 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 CYP2C18P33260 490 aa12.01□□□□□ -0.49
VTA1-203ENST00000452973 MLLT6P55198 1093 aaPredicted RBP12.01□□□□□ -0.49
VTA1-203ENST00000452973 RPL10AP62906 217 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms