RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 MAGEB5Q9BZ81 275 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 MAGEH1Q9H213 219 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PRDM16Q9HAZ2 1276 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 TMEM248Q9NWD8 314 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 HPCAL4Q9UM19 191 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 AP4E1Q9UPM8 1137 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 PCDHA13Q9Y5I0 950 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 OR51B4Q9Y5P0 310 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 RAD54BQ9Y620 910 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 COL4A2P08572 1712 aa9.11□□□□□ -0.95
COL8A1-203ENST00000452013 MUC3AQ02505 3323 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 EDDM13A0A1B0GTR0 161 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 CXorf51AA0A1B0GTR3 108 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 WASH4PA8MWX3 477 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 H3BRJ5 948 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 EEF2KO00418 725 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 MAP3K13O43283 966 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 RAMP2O60895 175 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 RHOBTB1O94844 696 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 LCA5LO95447 670 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ACADMP11310 421 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 HLA-EP13747 358 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 GABRG2P18507 467 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 FECHP22830 423 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 PRKCHP24723 683 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 HOXC13P31276 330 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 PLA2G5P39877 138 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ARL4AP40617 200 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 NOP2P46087 812 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 GEMIN4P57678 1058 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 TPI1P60174 286 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ZBTB16Q05516 673 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 MESDQ14696 234 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 POLD3Q15054 466 aaPredicted RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 HNRNPA1L2Q32P51 320 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 KIAA1211LQ6NV74 962 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 SLC36A4Q6YBV0 504 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 NLRP14Q86W24 1093 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 TXLNBQ8N3L3 684 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 LZTR1Q8N653 840 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 RTL3Q8N8U3 475 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ATP11CQ8NB49 1132 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 MDGA1Q8NFP4 955 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 TEKT4Q8WW24 435 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 RFFLQ8WZ73 363 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 SIPA1Q96FS4 1042 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 BTBD6Q96KE9 485 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 SPACA7Q96KW9 195 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 CALR3Q96L12 384 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 RPL10LQ96L21 214 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 MRGPRX3Q96LB0 322 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 MRGPRX1Q96LB2 322 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 CCDC114Q96M63 670 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 BAG1Q99933 345 aaPredicted RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 SNRNP25Q9BV90 132 aaKnown RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 TPSD1Q9BZJ3 242 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 EPC1Q9H2F5 836 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ZWILCHQ9H900 591 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ATP13A1Q9HD20 1204 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 PRSS16Q9NQE7 514 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 DNAI1Q9UI46 699 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 SLCO3A1Q9UIG8 710 aa9.1□□□□□ -0.95
COL8A1-203ENST00000452013 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
COL8A1-203ENST00000452013 ANAPC1Q9H1A4 1944 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 OBSL1O75147 1896 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 A0A0D9SEW6 157 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 TTC34A8MYJ7 566 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 CBX4O00257 560 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 KDELR3O43731 214 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ATP9BO43861 1147 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 MTA2O94776 668 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 NDUFA10O95299 355 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 DNTTP04053 509 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 KRT7P08729 469 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 RARAP10276 462 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 NDUFV2P19404 249 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 OXTRP30559 389 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 MAN1A1P33908 653 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 P2RY2P41231 377 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 SLC1A1P43005 524 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 CTSOP43234 321 aaPredicted RBP9.09□□□□□ -0.95
COL8A1-203ENST00000452013 CLCN6P51797 869 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 NDST2P52849 883 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 SEMA3BQ13214 749 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 KRT81Q14533 505 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 DLG2Q15700 870 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ELF2Q15723 593 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 DPYSL2Q16555 572 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 CA9Q16790 459 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 PPP6R3Q5H9R7 873 aaPredicted RBP9.09□□□□□ -0.95
COL8A1-203ENST00000452013 KCNT1Q5JUK3 1230 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ARTNQ5T4W7 220 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 KIAA1324Q6UXG2 1013 aaKnown RBP9.09□□□□□ -0.95
COL8A1-203ENST00000452013 PRR23BQ6ZRT6 265 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 RFX8Q6ZV50 586 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 ZNF354CQ86Y25 554 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 MAP7D3Q8IWC1 876 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 DCAF4L2Q8NA75 395 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 OR7D4Q8NG98 312 aa9.09□□□□□ -0.95
COL8A1-203ENST00000452013 OR52K2Q8NGK3 314 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms