RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DEFB133Q30KQ1 61 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 ZNF699Q32M78 642 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 Q6ZSR6 202 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 B3GNT8Q7Z7M8 397 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 UNC93AQ86WB7 457 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 DTX1Q86Y01 620 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 ZNF548Q8NEK5 533 aaPredicted RBP13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 KLK6Q92876 244 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 PTPRN2Q92932 1015 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 CCDC3Q9BQI4 270 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 IRX2Q9BZI1 471 aaPredicted RBP13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 STIM2Q9P246 746 aa13.01□□□□□ -0.33
AC004540.1-204ENST00000449537 CELSR2Q9HCU4 2923 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 ITIH6Q6UXX5 1313 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 PRAMEF33A0A0G2JMD5 474 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 A0A1W2PQ27 194 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 A0A1W2PQ64 194 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 A0A1W2PQC6 194 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 H3BM21 787 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 AQP9O43315 295 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 PRAMEF10O60809 474 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 VPS4BO75351 444 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 LATS1O95835 1130 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 IDEP14735 1019 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 NNMTP40261 264 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 CTSOP43234 321 aaPredicted RBP13□□□□□ -0.33
AC004540.1-204ENST00000449537 METAP1P53582 386 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 YWHAGP61981 247 aaKnown RBP eCLIP13□□□□□ -0.33
AC004540.1-204ENST00000449537 ECT2LQ008S8 904 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 PIK3R6Q5UE93 754 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 FAM46CQ5VWP2 391 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 RNF219Q5W0B1 726 aaPredicted RBP13□□□□□ -0.33
AC004540.1-204ENST00000449537 RFWD3Q6PCD5 774 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 SLC22A18ASQ8N1D0 253 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 FAM174AQ8TBP5 190 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 DNAJC19Q96DA6 116 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 NOX5Q96PH1 765 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 FGFBP2Q9BYJ0 223 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 PREBQ9HCU5 417 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 HMGXB4Q9UGU5 601 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 VPS4AQ9UN37 437 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 HBS1LQ9Y450 684 aaKnown RBP13□□□□□ -0.33
AC004540.1-204ENST00000449537 CEP83Q9Y592 693 aa13□□□□□ -0.33
AC004540.1-204ENST00000449537 A0A087X0B3 334 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 MOCS3O95396 460 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CSF2P04141 144 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 KRT7P08729 469 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 P4HA1P13674 534 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 NME1P15531 152 aaKnown RBP12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 HNRNPA2B1P22626 353 aaKnown RBP12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CLDN2P57739 230 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CYP24A1Q07973 514 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CNTN1Q12860 1018 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 BIRC3Q13489 604 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 KRTAP21-3Q3LHN1 58 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 PITRM1Q5JRX3 1037 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 AGBL4Q5VU57 503 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 NEK5Q6P3R8 708 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 ABI3BPQ7Z7G0 1075 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CCDC117Q8IWD4 279 aaPredicted RBP12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 LMX1AQ8TE12 382 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 USP7Q93009 1102 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 ELMO3Q96BJ8 720 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 TMEM74Q96NL1 305 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CATSPER2Q96P56 530 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 BOCQ9BWV1 1114 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 DUSP16Q9BY84 665 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 FOXP3Q9BZS1 431 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 FZD3Q9NPG1 666 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 OLA1Q9NTK5 396 aaKnown RBP12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 CUEDC1Q9NWM3 386 aaPredicted RBP12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 LOXL2Q9Y4K0 774 aa12.99□□□□□ -0.33
AC004540.1-204ENST00000449537 GOLGA6L7A0A1B0GV03 622 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 A0A1W2PQU0 124 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 IRAK2O43187 625 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 CD82P27701 267 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 NOS2P35228 1153 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 LONP1P36776 959 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 UQCRFS1P47985 274 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 MLLT10P55197 1068 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 KLRB1Q12918 225 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 FZD2Q14332 565 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 MCTP1Q6DN14 999 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 CAPRIN2Q6IMN6 1127 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 STXBP4Q6ZWJ1 553 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 SV2BQ7L1I2 683 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 RPL10LQ96L21 214 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 SPAG5Q96R06 1193 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 GFM1Q96RP9 751 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 SRRTQ9BXP5 876 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 SFMBT1Q9UHJ3 866 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 IPO11Q9UI26 975 aaKnown RBP12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 SARDHQ9UL12 918 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 PADI4Q9UM07 663 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
AC004540.1-204ENST00000449537 CRYBG3Q68DQ2 2970 aa12.97□□□□□ -0.33
AC004540.1-204ENST00000449537 SETD2Q9BYW2 2564 aaPredicted RBP12.97□□□□□ -0.33
AC004540.1-204ENST00000449537 A6NNZ2 444 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms