RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 OTOAQ7RTW8 1153 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 CNPY4Q8N129 248 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 FBXO22Q8NEZ5 403 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 PAWRQ96IZ0 340 aaKnown RBP16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 MANSC1Q9H8J5 431 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 ALG13Q9NP73 1137 aaKnown RBP16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 SYBUQ9NX95 663 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 IL37Q9NZH6 218 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 TRHDEQ9UKU6 1024 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 KCNU1A8MYU2 1149 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 CLTBP09497 229 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 CD68P34810 354 aaPredicted RBP16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 SERPINB9P50453 376 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 DEFB103AP81534 67 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 OLIG2Q13516 323 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 GALNTL6Q49A17 601 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 TEX44Q53QW1 395 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 ARHGAP36Q6ZRI8 547 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 CDHR3Q6ZTQ4 885 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 SPPL2BQ8TCT7 592 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 CDKL2Q92772 493 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 PTPRN2Q92932 1015 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 HAPLN3Q96S86 360 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 VAT1Q99536 393 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 GBA3Q9H227 469 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 HS3ST4Q9Y661 456 aa16.46■□□□□ 0.23
AP000253.1-201ENST00000449339 USP12O75317 370 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 DNAJC8O75937 253 aaPredicted RBP16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 PPP2R5DQ14738 602 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 SPOUT1Q5T280 376 aaKnown RBP16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 C1orf53Q5VUE5 145 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 CHSY1Q86X52 802 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 OR52K1Q8NGK4 314 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 SERPINB11Q96P15 392 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 NDFIP2Q9NV92 336 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 MAGED2Q9UNF1 606 aaPredicted RBP16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 EFEMP2O95967 443 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 POLBP06746 335 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 ATF6P18850 670 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 OR1D2P34982 312 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 CCNFP41002 786 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 NIPAL4Q0D2K0 466 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 PSMD5Q16401 504 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 PIK3R6Q5UE93 754 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 ITPRIPL1Q6GPH6 555 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 MSANTD2Q6P1R3 559 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 MARK2Q7KZI7 788 aaKnown RBP16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 MIB1Q86YT6 1006 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 DPF3Q92784 378 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC13A1Q9BZW2 595 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 PRDM5Q9NQX1 630 aaPredicted RBP16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 MPP6Q9NZW5 540 aa16.45■□□□□ 0.22
AP000253.1-201ENST00000449339 LAMA2P24043 3122 aaKnown RBP16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 FAM92AA1XBS5 289 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 ERI2A8K979 691 aaKnown RBP16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 DFFAO00273 331 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 HGSO14964 777 aaPredicted RBP16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 HMBSP08397 361 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 CSF2RAP15509 400 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 NFKB1P19838 968 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 CNTFP26441 200 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 SERPINB4P48594 390 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 TBX4P57082 545 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 USP41Q3LFD5 358 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 MANEALQ5VSG8 457 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 KCTD11Q693B1 232 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 ZSCAN18Q8TBC5 510 aaPredicted RBP16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC39A13Q96H72 371 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 TEKT5Q96M29 485 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC17A6Q9P2U8 582 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 TLR6Q9Y2C9 796 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 PLLPQ9Y342 182 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 USH1CQ9Y6N9 552 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 RPS6KL1Q9Y6S9 549 aa16.44■□□□□ 0.22
AP000253.1-201ENST00000449339 TRIM43BA6NCK2 446 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 ARHGAP42A6NI28 874 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 JCHAINP01591 159 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 TUBP50607 506 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 ZNF33AQ06730 810 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 BNIP1Q12981 228 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 FYB2Q5VWT5 728 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 NDUFAF2Q8N183 169 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 ARHGAP18Q8N392 663 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 DNAAF3Q8N9W5 541 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 TRIM43Q96BQ3 446 aaPredicted RBP16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 TBC1D31Q96DN5 1066 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC40A1Q9NP59 571 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 PCMTD2Q9NV79 361 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 MKS1Q9NXB0 559 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 MTRRQ9UBK8 725 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 VANGL2Q9ULK5 521 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 SLC38A8A6NNN8 435 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 E9PAM4 449 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 FGF10O15520 208 aaPredicted RBP16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 RASSF9O75901 435 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 NEFHP12036 1026 aa16.43■□□□□ 0.22
AP000253.1-201ENST00000449339 HOXC13P31276 330 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms