RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 ITGAVP06756 1048 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 COILP38432 576 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 PAPOLAP51003 745 aaKnown RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 OXCT1P55809 520 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 ZNF33AQ06730 810 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 PPIDQ08752 370 aaKnown RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 SNX1Q13596 522 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 PRKD1Q15139 912 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 SLC45A4Q5BKX6 768 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 HMCESQ96FZ2 354 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 TSGA13Q96PP4 275 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 THEGQ9P2T0 379 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 LIMD1Q9UGP4 676 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 PCYOX1Q9UHG3 505 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 FBXO10Q9UK96 956 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 DRG1Q9Y295 367 aaKnown RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 KIAA1549LQ6ZVL6 1849 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 A0A0D9SEW6 157 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 BCLAF3A2AJT9 711 aaKnown RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 ETFBP38117 255 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 SERINC3Q13530 473 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 AAK1Q2M2I8 961 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 CCDC137Q6PK04 289 aaKnown RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 CDKL3Q8IVW4 592 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 KLHL7Q8IXQ5 586 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 ETFBKMTQ8IXQ9 262 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 MMGT1Q8N4V1 131 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 TFB1MQ8WVM0 346 aaKnown RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 ALG14Q96F25 216 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 RUNDC3BQ96NL0 473 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 LGMNQ99538 433 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 ACE2Q9BYF1 805 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 KIAA1522Q9P206 1035 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-203ENST00000449049 OR51B4Q9Y5P0 310 aa14.39□□□□□ -0.11
SHMT2-203ENST00000449049 H7C0C1 242 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 RIOK3O14730 519 aaKnown RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 MAFKO60675 156 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 SLU7O95391 586 aaKnown RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 HLA-FP30511 346 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ACVRL1P37023 503 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 CSKP41240 450 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ATP5OP48047 213 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 LMAN2Q12907 356 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 NR1H3Q13133 447 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 SLC12A1Q13621 1099 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 RNF219Q5W0B1 726 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ARHGAP36Q6ZRI8 547 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 SLC44A3Q8N4M1 653 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ATPAF2Q8N5M1 289 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 LRRN4CLQ8ND94 238 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 OR7D4Q8NG98 312 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 XPO6Q96QU8 1125 aaKnown RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 KRT12Q99456 494 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 FEM1AQ9BSK4 669 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 BRD9Q9H8M2 597 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 TRPV5Q9NQA5 729 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 BRWD1Q9NSI6 2320 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 GTSE1Q9NYZ3 720 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 VAV1P15498 845 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 CCNCP24863 283 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 MZF1P28698 734 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 CD70P32970 193 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 KCNJ1P48048 391 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 PLK1P53350 603 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ITPRIPL2Q3MIP1 535 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ASTLQ6HA08 431 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 DARS2Q6PI48 645 aaKnown RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 KIAA0907Q7Z7F0 614 aaPredicted RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 C12orf40Q86WS4 652 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ADHFE1Q8IWW8 467 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 NOA1Q8NC60 698 aaKnown RBP14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ATL2Q8NHH9 583 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 LRRN4Q8WUT4 740 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 FATE1Q969F0 183 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 TMEM121Q9BTD3 319 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 MUC3BQ9H195 1237 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 ZNF148Q9UQR1 794 aa14.38□□□□□ -0.11
SHMT2-203ENST00000449049 TICRRQ7Z2Z1 1910 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 CFAP69A5D8W1 941 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 ZNF189O75820 626 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-203ENST00000449049 RBL1P28749 1068 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 GJA4P35212 333 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 TIGD7Q6NT04 549 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-203ENST00000449049 B4GALNT4Q76KP1 1039 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 CCDC13Q8IYE1 715 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 NAT16Q8N8M0 369 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 CCNYQ8ND76 341 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 C10orf88Q9H8K7 445 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 PDFQ9HBH1 243 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 USP29Q9HBJ7 922 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 ATP13A1Q9HD20 1204 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 AMACRQ9UHK6 382 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 IPO11Q9UI26 975 aaKnown RBP14.37□□□□□ -0.11
SHMT2-203ENST00000449049 GGA2Q9UJY4 613 aa14.37□□□□□ -0.11
SHMT2-203ENST00000449049 KDELR3O43731 214 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 TULP3O75386 442 aa14.36□□□□□ -0.11
SHMT2-203ENST00000449049 CISD3P0C7P0 127 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms