RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 PAGE1O75459 146 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 UPP2O95045 317 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 SARNPP82979 210 aaKnown RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 OCRLQ01968 901 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 ITGA9Q13797 1035 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 ATAD1Q8NBU5 361 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 PLCD4Q9BRC7 762 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 FTHL17Q9BXU8 183 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 C20orf96Q9NUD7 363 aaPredicted RBP15.13■□□□□ 0.01
SF1-211ENST00000448404 SIRPGQ9P1W8 387 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 DNAJC16Q9Y2G8 782 aa15.13■□□□□ 0.01
SF1-211ENST00000448404 ZCWPW2A0A1B0GU75 182 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 A0A1W2PQH9 124 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 TMEM88BA6NKF7 163 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 HACD1B0YJ81 288 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 GPR182O15218 404 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 ODC1P11926 461 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 CCNFP41002 786 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 OR1G1P47890 313 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 CCDC15Q0P6D6 951 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 USP4Q13107 963 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 LGSNQ5TDP6 509 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 FSTL4Q6MZW2 842 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 SCD5Q86SK9 330 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 PSTKQ8IV42 348 aaKnown RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 DENND6AQ8IWF6 608 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 NSMCE1Q8WV22 266 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 LRRC39Q96DD0 335 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 SPDL1Q96EA4 605 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 SNX15Q9NRS6 342 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 TXNDC16Q9P2K2 825 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 G3BP2Q9UN86 482 aaKnown RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 SLC27A5Q9Y2P5 690 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 ZNF487B1APH4 448 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 ZMPSTE24O75844 475 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 SORBS2O94875 1100 aaKnown RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 PCSK1P29120 753 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 CRHR1P34998 444 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 CXCR3P49682 368 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 PPIDQ08752 370 aaKnown RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 CTBP1Q13363 440 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 PCLAFQ15004 111 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 STEAP4Q687X5 459 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 ZSCAN18Q8TBC5 510 aaPredicted RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 WDR60Q8WVS4 1066 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 RSRC1Q96IZ7 334 aaKnown RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 FCRL2Q96LA5 508 aaPredicted RBP15.12■□□□□ 0.01
SF1-211ENST00000448404 KLHL5Q96PQ7 755 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 GIT1Q9Y2X7 761 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 TSC2P49815 1807 aa15.12■□□□□ 0.01
SF1-211ENST00000448404 A0A0U1RQF3 1178 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 AURKAO14965 403 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 ALDH1A2O94788 518 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 AP2A1O95782 977 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 POLBP06746 335 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 FGF3P11487 239 aaPredicted RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 STX3Q13277 289 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 ANKRD20A4Q4UJ75 823 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 MFSD14CQ5VZR4 134 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 IL31Q6EBC2 164 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 NAPRTQ6XQN6 538 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 MAVSQ7Z434 540 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 MIB1Q86YT6 1006 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 TMEM86AQ8N2M4 240 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 DTX3LQ8TDB6 740 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 SLC39A8Q9C0K1 460 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 DNAI2Q9GZS0 605 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 DMAP1Q9NPF5 467 aaPredicted RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 TAS2R1Q9NYW7 299 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 HBS1LQ9Y450 684 aaKnown RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 EME2A4GXA9 379 aaPredicted RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 PRR5-ARHGAP8B1AHC4 643 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 SCAMP3O14828 347 aaKnown RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 SEPT4O43236 478 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 SLC10A3P09131 477 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 KHDC1Q4VXA5 237 aaKnown RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 MBLAC2Q68D91 279 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 FAM171BQ6P995 826 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 SLC25A41Q8N5S1 370 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 MAGEC3Q8TD91 643 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 PTCD3Q96EY7 689 aaKnown RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 FRMD8Q9BZ67 464 aaPredicted RBP15.11■□□□□ 0.01
SF1-211ENST00000448404 SPC25Q9HBM1 224 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 SLC39A10Q9ULF5 831 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 NEU3Q9UQ49 428 aa15.11■□□□□ 0.01
SF1-211ENST00000448404 PLIN3O60664 434 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 PEX11AO75192 247 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 FBXO21O94952 628 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 MPP1Q00013 466 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 ARL13BQ3SXY8 428 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 CLLU1OSQ5K130 101 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 MARK2Q7KZI7 788 aaKnown RBP15.1■□□□□ 0.01
SF1-211ENST00000448404 LINC01599Q8WXQ3 324 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 EPAS1Q99814 870 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 IGSF9Q9P2J2 1179 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 RCOR3Q9P2K3 495 aaPredicted RBP15.1■□□□□ 0.01
SF1-211ENST00000448404 PACSIN3Q9UKS6 424 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 Q9Y3F1 56 aa15.1■□□□□ 0.01
SF1-211ENST00000448404 ARSAP15289 507 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms