RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 KANSL1Q7Z3B3 1105 aa25.12■■□□□ 1.61
PMS1-214ENST00000446877 ATP6V0D2Q8N8Y2 350 aa25.12■■□□□ 1.61
PMS1-214ENST00000446877 DCBLD1Q8N8Z6 715 aa25.12■■□□□ 1.61
PMS1-214ENST00000446877 GSDMAQ96QA5 445 aa25.12■■□□□ 1.61
PMS1-214ENST00000446877 GTPBP4Q9BZE4 634 aaKnown RBP25.12■■□□□ 1.61
PMS1-214ENST00000446877 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.12■■□□□ 1.61
PMS1-214ENST00000446877 PLXNA2O75051 1894 aa25.12■■□□□ 1.61
PMS1-214ENST00000446877 TEX51A0A1B0GUA7 166 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 PRAMEF26H0Y7S4 382 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 PMM2O15305 246 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 PLRG1O43660 514 aaKnown RBP25.11■■□□□ 1.61
PMS1-214ENST00000446877 C1QL1O75973 258 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 GPD2P43304 727 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 DAB2P98082 770 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 INSM1Q01101 510 aaPredicted RBP25.11■■□□□ 1.61
PMS1-214ENST00000446877 CCDC173Q0VFZ6 552 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 ZNF211Q13398 564 aaPredicted RBP25.11■■□□□ 1.61
PMS1-214ENST00000446877 PROX2Q3B8N5 592 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 CCDC40Q4G0X9 1142 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 RABGAP1LQ5R372 815 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 TTC39BQ5VTQ0 682 aaPredicted RBP25.11■■□□□ 1.61
PMS1-214ENST00000446877 ZNF605Q86T29 641 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 TRIM69Q86WT6 500 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 CCAR2Q8N163 923 aaKnown RBP25.11■■□□□ 1.61
PMS1-214ENST00000446877 FAM131CQ96AQ9 280 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 KLHDC7BQ96G42 594 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 MED15Q96RN5 788 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 POPDC2Q9HBU9 364 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 SLC25A13Q9UJS0 675 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 ZDHHC9Q9Y397 364 aa25.11■■□□□ 1.61
PMS1-214ENST00000446877 TRIM49BA6NDI0 452 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 KCNU1A8MYU2 1149 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 C1QTNF3-AMACRE9PGA6 284 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 SIGLEC6O43699 453 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 TRUB2O95900 331 aaKnown RBP25.1■■□□□ 1.61
PMS1-214ENST00000446877 RPL34P49207 117 aaKnown RBP25.1■■□□□ 1.61
PMS1-214ENST00000446877 PLK1P53350 603 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 METAP1P53582 386 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 YWHAZP63104 245 aaKnown RBP25.1■■□□□ 1.61
PMS1-214ENST00000446877 CNTN1Q12860 1018 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 TBC1D25Q3MII6 688 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 KDM7AQ6ZMT4 941 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 STK32AQ8WU08 396 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 FRS2Q8WU20 508 aa25.1■■□□□ 1.61
PMS1-214ENST00000446877 ASH1LQ9NR48 2969 aaKnown RBP25.1■■□□□ 1.61
PMS1-214ENST00000446877 MT-CO3P00414 261 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 SLC2A3P11169 496 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 GCNT1Q02742 428 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 TLE3Q04726 772 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 STIM1Q13586 685 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 POM121L1PQ3SYA9 428 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 CIR1Q86X95 450 aaPredicted RBP25.09■■□□□ 1.61
PMS1-214ENST00000446877 ERCC4Q92889 916 aaPredicted RBP25.09■■□□□ 1.61
PMS1-214ENST00000446877 RNF34Q969K3 372 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 SARDHQ9UL12 918 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 PPM1HQ9ULR3 514 aa25.09■■□□□ 1.61
PMS1-214ENST00000446877 PTPRQQ9UMZ3 2332 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 A0A1B0GVM2 712 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 TCAF2A6NFQ2 919 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 TRIM38O00635 465 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 PSMA7O14818 248 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 P4HA2O15460 535 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 KRT5P13647 590 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 VASPP50552 380 aaPredicted RBP25.08■■□□□ 1.61
PMS1-214ENST00000446877 CXADRP78310 365 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 DENND1BQ6P3S1 775 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 SMARCE1Q969G3 411 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 CEP63Q96MT8 703 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 LGMNQ99538 433 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 SLC4A5Q9BY07 1137 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 THAP9Q9H5L6 903 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 FAM204AQ9H8W3 233 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 PREBQ9HCU5 417 aa25.08■■□□□ 1.61
PMS1-214ENST00000446877 ALOX15BO15296 676 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 MED7O43513 233 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 ATP9BO43861 1147 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 RNGTTO60942 597 aaKnown RBP25.07■■□□□ 1.6
PMS1-214ENST00000446877 CDK17Q00537 523 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 DLG2Q15700 870 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 AGBL4Q5VU57 503 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 SPACA3Q8IXA5 215 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 SLC25A45Q8N413 288 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 ZNF843Q8N446 348 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 EHBP1Q8NDI1 1231 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 LMO3Q8TAP4 145 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 KLHL11Q9NVR0 708 aa25.07■■□□□ 1.6
PMS1-214ENST00000446877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.06■■□□□ 1.6
PMS1-214ENST00000446877 CAPN8A6NHC0 703 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 MCF2LO15068 1137 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 BNIP3LO60238 219 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 IGLV3-25P01717 112 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 DGKAP23743 735 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 CCR1P32246 355 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 CCDC15Q0P6D6 951 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 ZNF177Q13360 481 aaPredicted RBP25.06■■□□□ 1.6
PMS1-214ENST00000446877 TMEM110Q86TL2 294 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 ERICH1Q86X53 443 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 ARHGEF19Q8IW93 802 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 ZNF248Q8NDW4 579 aa25.06■■□□□ 1.6
PMS1-214ENST00000446877 RPRD1AQ96P16 312 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms