RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FZD10Q9ULW2 581 aa15.23■□□□□ 0.03
HDAC4-204ENST00000446876 USP18Q9UMW8 372 aa15.23■□□□□ 0.03
HDAC4-204ENST00000446876 NENFQ9UMX5 172 aa15.23■□□□□ 0.03
HDAC4-204ENST00000446876 SCINQ9Y6U3 715 aa15.23■□□□□ 0.03
HDAC4-204ENST00000446876 CREB3O43889 395 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 RHOBTB1O94844 696 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 TPM1P09493 284 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 PTGER3P43115 390 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 RPS14P62263 151 aaKnown RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 RPL6Q02878 288 aaKnown RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 CREB5Q02930 508 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 TBX2Q13207 712 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 BYSLQ13895 437 aaKnown RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 ARID5BQ14865 1188 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 CA9Q16790 459 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 C6orf118Q5T5N4 469 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 ACBD5Q5T8D3 534 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 SETD3Q86TU7 594 aaPredicted RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 NLRP14Q86W24 1093 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 BTBD6Q96KE9 485 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 CHP1Q99653 195 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 PACSIN1Q9BY11 444 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 USP36Q9P275 1121 aaKnown RBP15.22■□□□□ 0.03
HDAC4-204ENST00000446876 SUN2Q9UH99 717 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 DNAI1Q9UI46 699 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 VPS51Q9UID3 782 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 SLC25A13Q9UJS0 675 aa15.22■□□□□ 0.03
HDAC4-204ENST00000446876 ATXN2Q99700 1313 aaKnown RBP15.21■□□□□ 0.03
HDAC4-204ENST00000446876 ZNF217O75362 1048 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 MT-CO1P00395 513 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 DESP17661 470 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 MPLP40238 635 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 TPMTP51580 245 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 GALCP54803 685 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 SULT2A1Q06520 285 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 ASTE1Q2TB18 679 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-204ENST00000446876 C9orf64Q5T6V5 341 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 LINGO4Q6UY18 593 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 CYP4V2Q6ZWL3 525 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-204ENST00000446876 LPCAT2Q7L5N7 544 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 FAM124AQ86V42 546 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 C11orf74Q86VG3 221 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 STK40Q8N2I9 435 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 KDM1BQ8NB78 822 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 PTPRN2Q92932 1015 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 LOXL4Q96JB6 756 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 SPON2Q9BUD6 331 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 SNRNP25Q9BV90 132 aaKnown RBP15.21■□□□□ 0.03
HDAC4-204ENST00000446876 NUP85Q9BW27 656 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 MRPL47Q9HD33 250 aaKnown RBP15.21■□□□□ 0.03
HDAC4-204ENST00000446876 SEMA4GQ9NTN9 838 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 AP4E1Q9UPM8 1137 aa15.21■□□□□ 0.03
HDAC4-204ENST00000446876 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.21■□□□□ 0.03
HDAC4-204ENST00000446876 GON4LQ3T8J9 2241 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 WDR87Q6ZQQ6 2873 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF292O60281 2723 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 EDDM13A0A1B0GTR0 161 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ILVBLA1L0T0 632 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 K7ERQ8 282 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 LRCH4O75427 683 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 CYP1A2P05177 515 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ACADMP11310 421 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 SRCP12931 536 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 TCF4P15884 667 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 RHOQP17081 205 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 MIPP30301 263 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 L1CAMP32004 1257 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ACVRL1P37023 503 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF75DP51815 510 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 GNA12Q03113 381 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 SEMA3BQ13214 749 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 SF3A2Q15428 464 aaKnown RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 SLC18A3Q16572 532 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ACCSLQ4AC99 568 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ZNF776Q68DI1 518 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 TCEAL6Q6IPX3 200 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 Q6ZVU0 165 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 CYP2U1Q7Z449 544 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 METTL3Q86U44 580 aaKnown RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 DCAF4L2Q8NA75 395 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 FNIP1Q8TF40 1166 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 FRS2Q8WU20 508 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 TCEAL3Q969E4 200 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 TOE1Q96GM8 510 aaKnown RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 PPP1R9BQ96SB3 815 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 C2orf49Q9BVC5 232 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 RSPH9Q9H1X1 276 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 DEF6Q9H4E7 631 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ATP13A1Q9HD20 1204 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ITM2CQ9NQX7 267 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 SPTLC3Q9NUV7 552 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 TMEM248Q9NWD8 314 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ZNHIT6Q9NWK9 470 aaKnown RBP15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ANAPC7Q9UJX3 599 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 ACTL7AQ9Y615 435 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 CFAP54Q96N23 3096 aa15.2■□□□□ 0.02
HDAC4-204ENST00000446876 BCLAF3A2AJT9 711 aaKnown RBP15.19■□□□□ 0.02
HDAC4-204ENST00000446876 TARSL2A2RTX5 802 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms