RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 RTKNQ9BST9 563 aa24.6■■□□□ 1.53
C9orf3-207ENST00000445181 CTTNBP2NLQ9P2B4 639 aa24.6■■□□□ 1.53
C9orf3-207ENST00000445181 ERVW-1Q9UQF0 538 aa24.6■■□□□ 1.53
C9orf3-207ENST00000445181 CREB3O43889 395 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 GDF9O60383 454 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 LRIG2O94898 1065 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 H2AFZP0C0S5 128 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 GABRG2P18507 467 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 BCKDHBP21953 392 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 PLK1P53350 603 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 PLA2G2CQ5R387 149 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 H2AFVQ71UI9 128 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 ZNF366Q8N895 744 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 C12orf50Q8NA57 414 aaPredicted RBP24.59■■□□□ 1.53
C9orf3-207ENST00000445181 OR52K2Q8NGK3 314 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 RLN3Q8WXF3 142 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 EPAS1Q99814 870 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 PACSIN1Q9BY11 444 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 TMEM245Q9H330 911 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 IP6K2Q9UHH9 426 aa24.59■■□□□ 1.53
C9orf3-207ENST00000445181 SRPRAP08240 638 aaKnown RBP24.58■■□□□ 1.53
C9orf3-207ENST00000445181 NDUFV2P19404 249 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 MIPP30301 263 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 L1CAMP32004 1257 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 NNMTP40261 264 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 P2RY2P41231 377 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 CREB5Q02930 508 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 PIGHQ14442 188 aaPredicted RBP24.58■■□□□ 1.53
C9orf3-207ENST00000445181 ACAP1Q15027 740 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 AASDHQ4L235 1098 aaPredicted RBP24.58■■□□□ 1.53
C9orf3-207ENST00000445181 MANEALQ5VSG8 457 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 PMS2CLQ68D20 193 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 ARFGAP1Q8N6T3 406 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 ZNF564Q8TBZ8 553 aaPredicted RBP24.58■■□□□ 1.53
C9orf3-207ENST00000445181 BTBD6Q96KE9 485 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 RPL10LQ96L21 214 aaKnown RBP24.58■■□□□ 1.53
C9orf3-207ENST00000445181 SMOC1Q9H4F8 434 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 VPS45Q9NRW7 570 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 SUN2Q9UH99 717 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 SLC25A13Q9UJS0 675 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 AP4E1Q9UPM8 1137 aa24.58■■□□□ 1.53
C9orf3-207ENST00000445181 BCLAF3A2AJT9 711 aaKnown RBP24.57■■□□□ 1.52
C9orf3-207ENST00000445181 DCDC2BA2VCK2 349 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 MYO1FO00160 1098 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 SLC30A4O14863 429 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 LRCH4O75427 683 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 RHOQP17081 205 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 KRT83P78385 493 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 ERMARDQ5T6L9 678 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 KIAA1324Q6UXG2 1013 aaKnown RBP24.57■■□□□ 1.52
C9orf3-207ENST00000445181 SPACA7Q96KW9 195 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 MRGPRX3Q96LB0 322 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 C2orf49Q9BVC5 232 aaPredicted RBP24.57■■□□□ 1.52
C9orf3-207ENST00000445181 SLC6A17Q9H1V8 727 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 DHX35Q9H5Z1 703 aaKnown RBP24.57■■□□□ 1.52
C9orf3-207ENST00000445181 CD248Q9HCU0 757 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 GPATCH2LQ9NWQ4 482 aa24.57■■□□□ 1.52
C9orf3-207ENST00000445181 DOCK4Q8N1I0 1966 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 MED19A0JLT2 244 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-207ENST00000445181 MAP3K13O43283 966 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 TMEM253P0C7T8 217 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 EPHB2P29323 1055 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 STK19P49842 368 aaPredicted RBP24.56■■□□□ 1.52
C9orf3-207ENST00000445181 BYSLQ13895 437 aaKnown RBP24.56■■□□□ 1.52
C9orf3-207ENST00000445181 ARTNQ5T4W7 220 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 DAB2IPQ5VWQ8 1189 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 FRMD1Q8N878 549 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 KDM1BQ8NB78 822 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 ALG14Q96F25 216 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 MRGPRX1Q96LB2 322 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 PEBP4Q96S96 227 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 SPON2Q9BUD6 331 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 RETREG1Q9H6L5 497 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 PRDM16Q9HAZ2 1276 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 UVRAGQ9P2Y5 699 aa24.56■■□□□ 1.52
C9orf3-207ENST00000445181 MUC22E2RYF6 1773 aaPredicted RBP24.55■■□□□ 1.52
C9orf3-207ENST00000445181 A0A0D9SEW6 157 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 ILVBLA1L0T0 632 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 PCK1P35558 622 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 SSR1P43307 286 aaKnown RBP24.55■■□□□ 1.52
C9orf3-207ENST00000445181 MAPKAPK2P49137 400 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 MAP7D1Q3KQU3 841 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 ZNF783Q6ZMS7 281 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 CACUL1Q86Y37 369 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 OR2T3Q8NH03 318 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 MYO19Q96H55 970 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 PANX2Q96RD6 677 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 SNRNP25Q9BV90 132 aaKnown RBP24.55■■□□□ 1.52
C9orf3-207ENST00000445181 RXFP3Q9NSD7 469 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 TMEM248Q9NWD8 314 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 DNAI1Q9UI46 699 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 SLCO3A1Q9UIG8 710 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 OR51B4Q9Y5P0 310 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 CACNA1AO00555 2505 aa24.55■■□□□ 1.52
C9orf3-207ENST00000445181 TTC34A8MYJ7 566 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 DHPSP49366 369 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-207ENST00000445181 TPI1P60174 286 aa24.54■■□□□ 1.52
C9orf3-207ENST00000445181 CAMK2GQ13555 558 aaPredicted RBP24.54■■□□□ 1.52
C9orf3-207ENST00000445181 HNRNPA1L2Q32P51 320 aaKnown RBP24.54■■□□□ 1.52
C9orf3-207ENST00000445181 ACCSLQ4AC99 568 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms