RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 ARCQ7LC44 396 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 ADAT2Q7Z6V5 191 aaKnown RBP17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 PHF13Q86YI8 300 aaPredicted RBP17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 DRC7Q8IY82 874 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 STK40Q8N2I9 435 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 CADM4Q8NFZ8 388 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 OR8D1Q8WZ84 308 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 NT5C3BQ969T7 300 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 LMLNQ96KR4 655 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 MRGPRX3Q96LB0 322 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 NAP1L5Q96NT1 182 aaPredicted RBP17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 FEM1AQ9BSK4 669 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 ADAM33Q9BZ11 813 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 PABPC3Q9H361 631 aaKnown RBP17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 FSCN3Q9NQT6 498 aa17.22■□□□□ 0.35
TSPAN9-204ENST00000444315 A0A1W2PP55 124 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 C2CD4BA6NLJ0 364 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 C1QTNF3-AMACRE9PGA6 284 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 MID1O15344 667 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 ADH1BP00325 375 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 SERPINF2P08697 491 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 RECQLP46063 649 aaPredicted RBP17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 ELAVL3Q14576 367 aaKnown RBP17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 CCDC14Q49A88 953 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 ALFQ53S48 1182 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 TRNP1Q6NT89 227 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 SLC23A3Q6PIS1 610 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 MON1BQ7L1V2 547 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 STRADAQ7RTN6 431 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 SETD3Q86TU7 594 aaPredicted RBP17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 CPLX3Q8WVH0 158 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 ZNF419Q96HQ0 510 aaPredicted RBP17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 C1orf74Q96LT6 269 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 FUCA2Q9BTY2 467 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 RSPH9Q9H1X1 276 aaPredicted RBP17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 HAUS4Q9H6D7 363 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 SGK2Q9HBY8 427 aa17.21■□□□□ 0.35
TSPAN9-204ENST00000444315 A0A1B0GTW7 788 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 LRRC72A6NJI9 287 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 CBX4O00257 560 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 SLC8A1P32418 973 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 RFC1P35251 1148 aaPredicted RBP17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 PTPN9P43378 593 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 DNA2P51530 1060 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 FAM46CQ5VWP2 391 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 WDR59Q6PJI9 974 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 TBC1D31Q96DN5 1066 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 ATP13A1Q9HD20 1204 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 ANLNQ9NQW6 1124 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 DYRK4Q9NR20 520 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 OR12D3Q9UGF7 316 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 EIF2B4Q9UI10 523 aaKnown RBP17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 ITIH6Q6UXX5 1313 aa17.2■□□□□ 0.34
TSPAN9-204ENST00000444315 SIGLEC16A6NMB1 481 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 CCP110O43303 1012 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 ATMINO43313 823 aaPredicted RBP17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 OPHN1O60890 802 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 RRM1P23921 792 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 ACSL1P33121 698 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 PLK1P53350 603 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 TEAD4Q15561 434 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 DLG2Q15700 870 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 C9orf64Q5T6V5 341 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 SH3PXD2AQ5TCZ1 1133 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 RETSATQ6NUM9 610 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 Q6ZVU0 165 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 SLFN11Q7Z7L1 901 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 MCOLN2Q8IZK6 566 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 RYBPQ8N488 228 aaPredicted RBP17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 OR14C36Q8NHC7 312 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 BAP1Q92560 729 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 ZNF653Q96CK0 615 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 TRIM11Q96F44 468 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 MYO19Q96H55 970 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 C6orf106Q9H6K1 298 aaPredicted RBP17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 PARVAQ9NVD7 372 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 IFNKQ9P0W0 207 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 MYO1AQ9UBC5 1043 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 HPCAL4Q9UM19 191 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 TBC1D30Q9Y2I9 924 aa17.19■□□□□ 0.34
TSPAN9-204ENST00000444315 MED19A0JLT2 244 aaPredicted RBP17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 METTL12A8MUP2 240 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 BCAT2O15382 392 aaPredicted RBP17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 CREB3O43889 395 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 SNAP91O60641 907 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 PLEKP08567 350 aaPredicted RBP17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 SKILP12757 684 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 VAV1P15498 845 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 C5AR1P21730 350 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 PSMA2P25787 234 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 ADRA1BP35368 520 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 ETFBP38117 255 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 NOVA1P51513 510 aaKnown RBP17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 ZNF143P52747 638 aaPredicted RBP17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 PTP4A2Q12974 167 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 NR1I3Q14994 352 aa17.18■□□□□ 0.34
TSPAN9-204ENST00000444315 NFKBIBQ15653 356 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms